Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 1e-16
seq337 86.0 7e-12
>seq1
Length=193982
Score = 102 bits (112), Expect = 1e-16
Identities = 299/458 (65%), Gaps = 2/458 (0%)
Strand=Plus/Plus
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
|| || || ||||| ||||| ||||| | | |||||||| | ||||| |||
Sbjct 92519 GACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTTCGCAGCAC 92578
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
| |||||| || ||| || || | ||||| ||||| ||||| |||||| |||
Sbjct 92579 AGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCC 92638
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-C 106647
||||| | |||| |||| | || || || ||| | || ||| || || | ||| | |
Sbjct 92639 TTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGCGTACCAGAGC 92698
Query 106648 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 106707
|| | | || ||| | || | || |||||| ||| |||| |||||||||
Sbjct 92699 TTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGC 92757
Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 106767
|| || |||||||| |||||| ||||| || || || || || | || |
Sbjct 92758 CTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGT 92817
Query 106768 CCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 106827
||| || || |||||| ||||||||||| || || |||||||| || | | ||
Sbjct 92818 CCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAA 92877
Query 106828 GAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 106887
|| || | | ||| |||| || | || ||||| || | || || || |
Sbjct 92878 AAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAA 92937
Query 106888 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 106925
|| ||| || ||||| ||||| || |||| |||| ||
Sbjct 92938 GACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAG 92975
>seq337
Length=168310
Score = 86.0 bits (94), Expect = 7e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351
|||||||| || || || || ||||| ||||| | || |||||||| || ||||||
Sbjct 158136 CCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTC 158077
Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
|| | ||| |||| | | ||| || ||| ||||||||||||||| || ||| ||
Sbjct 158076 TTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAA 158017
Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATTT 117470
|||| |||||| ||||||| |||| |||| || | ||| | ||||| |
Sbjct 158016 GCAATGAGGCGCGATGCGAAGG-TCGAGTTCTTGTCGCAGATCCAACGAAGGGCCCAGTC 157958
Query 117471 CGCCTTCTTCTCAATACATGGTAC 117494
|||||||||| || || || ||
Sbjct 157957 GGCCTTCTTCTTGATGCACGGGAC 157934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589954206615440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |