Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 136 3e-27
>seq1393
Length=54601
Score = 136 bits (150), Expect = 3e-27
Identities = 257/378 (68%), Gaps = 0/378 (0%)
Strand=Plus/Minus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
||||||| || || |||||||| || ||| || ||||| |||| || |||||
Sbjct 42648 TGTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGA 42589
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127
|||| | || | || |||||| | | ||| | | | |||||||||||| |
Sbjct 42588 TGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCACAC 42529
Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187
| ||| |||||| | | || |||| |||||| || ||||| |||| ||||||||
Sbjct 42528 CTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTGGA 42469
Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30247
| ||||| || || || ||||| ||||| || | |||| || ||| |||| | |
Sbjct 42468 AGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGGA 42409
Query 30248 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 30307
| || | || ||||| | ||||||||||| || || ||||||||| || ||
Sbjct 42408 ACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAGGCTTCGATG 42349
Query 30308 TTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCT 30367
|||| ||| ||| |||||||| || || | | |||||| | ||||| | ||
Sbjct 42348 ATGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGCGCGCAGGAAGACGCGCT 42289
Query 30368 TGGTCGTGAGGAGGGGAA 30385
|||| |||||||| ||||
Sbjct 42288 TGGTGGTGAGGAGCGGAA 42271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408599642022638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |