Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq114 430 2e-115 seq3350 120 4e-22 seq326 114 2e-20 seq3448 89.7 7e-13 >seq114 Length=54951 Score = 430 bits (476), Expect = 2e-115 Identities = 985/1477 (67%), Gaps = 22/1477 (1%) Strand=Plus/Plus Query 195412 CTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCC 195471 || |||||| | || ||||| | || || |||| || || ||| || |||||||| Sbjct 36333 CTATACAGACACCGAGCGTCTGATCGGTGACTCCGCCAAGAACCAGGTCGCCATGAACCC 36392 Query 195472 TATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGT 195531 ||| || ||||| ||||| |||||| | || || |||||||| || | || Sbjct 36393 CCACAACACCGTCTTCGACGCTAAGCGTTTGATCGGCCGCAAGTTCGACGACCCCGAGGT 36452 Query 195532 CCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTA 195590 ||| | ||||| ||| ||| | | | | || || | | ||| ||||| Sbjct 36453 CCAGGCGGATATGAAGCACTTCCCCTTTAAGGTCATTGAGAAGAGCGGC----AAGCCCG 36508 Query 195591 TGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTA 195650 | || | || || || | || ||| |||| || |||| || || ||||| || | Sbjct 36509 TCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACTTTCACTCCTGAGGAGATTTCCTCCA 36568 Query 195651 TGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATG 195710 |||| | | ||||||| ||||||||| || |||| | | ||| || || || | | Sbjct 36569 TGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACCTCGGTGGCACCGTCAACAACG 36628 Query 195711 CAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG 195770 | || || ||||| || || ||||||| || || || || ||||| || ||||| || | Sbjct 36629 CTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCCG 36688 Query 195771 CTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 | ||||| || || ||| || | || ||||| || || || || ||||| || | Sbjct 36689 GTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCTGCTGCTATCG 36748 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC---GAAGATAAAAATGTATTGATCTTTGATCTCG 195887 | || ||||| |||||||| || | | || || || ||||||| ||||| | Sbjct 36749 CCTACGGTCTTGACAAGAA---GGCCACTGGCGAGCGCAACGTCCTGATCTTCGATCTTG 36805 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 |||||||||| || |||||||| || || | ||| || | ||||| ||||| || ||| Sbjct 36806 GTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGGAGGGTATCTTCGAGGTCAAGT 36865 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-T 196006 | || || ||||| ||||| || |||||||| || || || || ||| || || | Sbjct 36866 CCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTTGACAACCGCCTTGTCAACCACT 36925 Query 196007 TTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTT 196066 | ||| | || ||| ||||| | || || || | || || || | || || Sbjct 36926 TCGTC-AACGAATTCAAGAGAAAGCACAAAAAGGACTTGACTACCAACGCTCGCGCCCTC 36984 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 || || || | ||||| || || |||||||| || || || || | || || || Sbjct 36985 CGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACCCTGTCCAGCTCTGCGCAGACC 37044 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | ||||| || || |||| || || ||||||||||| || | || |||||||| Sbjct 37045 TCCATCGAGATCGACTCCCTGTTCGAGGGTATTGACTTCTACACCTCCATCACCCGTGCT 37104 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 ||||| || ||| | | || | || | ||||| ||||| || | || Sbjct 37105 CGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGAGCCTGTCGAGCGTGTC 37164 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||||| || ||||| || | || || ||||| || || || || Sbjct 37165 CTCCGTGATGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTCGTTGGTGGCTCC 37224 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || ||||| || ||||| |||| ||||||||| || || ||| Sbjct 37225 ACCCGTATCCCCAAGATCCAGAAGATGGTTTCCGACTTCTTCAACGGCAAGGAGCCCAAC 37284 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| ||||| || ||||| || ||||| ||||| ||||| ||||| || Sbjct 37285 AAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGCTATCCTG 37344 Query 196427 TCAGGTGTTGACAAT------AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCC 196480 || || ||||| | || | | | || ||||||| || ||||| || || Sbjct 37345 TCCGG---TGACACTTCCTCCAAGTCCACCAACGAGATTCTGCTTCTCGATGTCGCTCCT 37401 Query 196481 GTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACA 196540 | ||||| ||| | || || || |||||||| |||||| | || | | ||||| Sbjct 37402 CTCTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACTCCTCTGATCAAGCGCAACACC 37461 Query 196541 ACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTT 196600 || ||||| || |||||| | ||||| || || | ||| || || || ||||| Sbjct 37462 ACCATTCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTCAGCGACAACCAGCCCGGTGTC 37521 Query 196601 CATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACT 196660 | ||| || || | || || || || | || | ||||| ||| | || || || | Sbjct 37522 CTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTCGGCAAG 37581 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 ||||| | || || ||||| | || ||| | |||||||| ||||| | || |||| Sbjct 37582 TTCGAGCTCACCGGCATTCCCCCGGCTCCCCGTGGTGTTCCCCAGATCGAGGTCACCTTC 37641 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 || | || || || || || | |||||| | ||| || |||| ||||||| | Sbjct 37642 GACGTTGATGCCAACGGTATCATGAACGTCTCCGCTCTCGAGAAGGGCACTGGCAAGACC 37701 Query 196781 GAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATG 196840 | ||||| || |||||||| |||||||| || || || |||||||| || || |||||| Sbjct 37702 AACAAGATCGTCATTACCAACGACAAGGGCCGTCTGTCCAAGGAGGAGATCGAGCGTATG 37761 Query 196841 GTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 || || || || ||||||| || || || |||| Sbjct 37762 CTTGCTGAGGCCGAGAAGTACAAGGCCGAGGATGAGG 37798 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| |||||||| ||||| ||||| ||| |||| | Sbjct 54464 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAAGAGC 54523 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| || |||||||| || || || || ||||| || Sbjct 54524 AAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCCTCATCTTCGCTGGCAAG 54583 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || || ||| || |||||| | || |||||||| || || ||| Sbjct 54584 CAGCTTGAGGATGGCCGCACTCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTTCAC 54643 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 54644 CTCGTCCTCCGCCTGCGTGGTGGT 54667 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| |||||| ||||| ||||| ||| |||| | Sbjct 54747 ACTGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGACACCATCGACAACGTCAAGAGC 54806 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| |||||||| || || ||||| || || ||||| || || || Sbjct 54807 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTGATTTTCGCCGGCAAG 54866 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || || || | || |||||| | || |||||| ||||| ||| Sbjct 54867 CAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAC 54926 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 54927 CTCGTCCTCCGTCTCCGCGGCGGT 54950 >seq3350 Length=15240 Score = 120 bits (132), Expect = 4e-22 Identities = 201/284 (71%), Gaps = 9/284 (3%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| ||||| || || ||||||| || | || || || || |||||||| Sbjct 1009 GCCGTTGTCACTGTTCCCGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 950 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828 | | | ||||| ||||| || |||| | | || |||| || || || ||||| || | Sbjct 949 GGTACCATTGCCGGTCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACCGCGGCCGCTCT 891 Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAA----ATGT-ATTGATCTTTGAT 195883 || || |||||||||||||| | ||| |||| || | | |||| ||| ||| Sbjct 890 GGCCTACGGTCTGGACAAGAAGGATGAC-AAGACTGAACGCCAGATCATTG-TCTACGAT 833 Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943 || ||||||||||| || ||||| || |||| | | | || | || | ||||| || Sbjct 832 CTTGGTGGTGGTACTTTCGATGTTTCCATTCTTACTGTCGACGAGGGCGTTTTCGAGGTC 773 Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||||| |||||||| ||||| || |||||||| || || || Sbjct 772 CAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 729 >seq326 Length=79088 Score = 114 bits (126), Expect = 2e-20 Identities = 189/272 (69%), Gaps = 3/272 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || || ||||||| || || || ||||| || |||||||| | ||| ||| Sbjct 19487 ACTGTCCCGGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTGCCATT 19546 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || || || || || || || || || ||||| || ||| Sbjct 19547 GCCGGGCTCAACGTCCTCCGTATCATTAACGAGCCTACTGCCGCCGCCATTGCCTACGGT 19606 Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| || | || || |||||| || || ||||||||| Sbjct 19607 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTGATCTACGACCTTGGTGGTGGT 19666 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | || | || ||| | ||| || ||||| || ||| Sbjct 19667 ACTTTCGATGTCTCCCTTCTGCACATCCAGGGCGGTGTCTTCACTGTCAAGGCCACCGCT 19726 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || |||||| | || ||||| Sbjct 19727 GGTGACACTCACCTTGGTGGTCAGGACTTCGA 19758 >seq3448 Length=92961 Score = 89.7 bits (98), Expect = 7e-13 Identities = 218/328 (66%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| | | || || | ||| || | || || || ||| Sbjct 39437 AAGATGAAGGAGACCGCCGAGTCTTACCTTGGCAAGAATGTCAAGAACGCCGTCGTCACT 39378 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| || | | || | Sbjct 39377 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCAGATCTCT 39318 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || ||| || | || |||| || || || || || || | || || ||||| Sbjct 39317 GGCCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACGGCTGCCGCTCTCGCCTACGGTCT 39259 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || ||| | ||||| | | || ||| |||||| ||||||||||| || Sbjct 39258 TGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTATGATCTTGGTGGTGGTACTTT 39205 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || |||| | || | || | ||||| || ||| | || ||||| Sbjct 39204 CGATATTTCCATTCTTGAGATCCAGAACGGCGTCTTCGAGGTCAAGTCCACCAACGGTGA 39145 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || ||||| || || |||||| Sbjct 39144 CACTCACCTCGGTGGCGAGGACTTCGAT 39117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657832746852320