Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3172 138 3e-27 >seq3172 Length=37270 Score = 138 bits (152), Expect = 3e-27 Identities = 198/279 (71%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||||| ||| || | | ||||| || |||||| ||||| || ||||| | || || Sbjct 5766 CATAACGTCCTCAAGAGCCTTGACTAGACGACGTTGAATGTATCCAGTCTCGGCAGTCTT 5707 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 ||||| ||||| || ||||| |||||||| |||| || |||||||| | ||| || Sbjct 5706 GACAGCAGTATCGATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCCGAGGG 5647 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 ||| || | | ||||| ||| ||||| || | ||| ||||||| | |||| Sbjct 5646 AGTTAGACCACGCAGGTAGGAGTTCTGGACGAATCCTCTAGCCGCGGGCGAGTAGTCGTC 5587 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 ||| |||||||| |||| |||| || || | ||| |||| |||||||| || ||||| Sbjct 5586 CTTTGTAAAGTGCGGCAAAGTCCGGTACTTGAATCCGAATGGAATACGCTTACCCTCAAC 5527 Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 | ||| || || | || | ||||||||||||| || Sbjct 5526 GGACTGTTGACCGACAAGCGCAGTCATCTGCGAAATGTT 5488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471749599267222