Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3172 138 3e-27
>seq3172
Length=37270
Score = 138 bits (152), Expect = 3e-27
Identities = 198/279 (71%), Gaps = 0/279 (0%)
Strand=Plus/Minus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||||| ||| || | | ||||| || |||||| ||||| || ||||| | || ||
Sbjct 5766 CATAACGTCCTCAAGAGCCTTGACTAGACGACGTTGAATGTATCCAGTCTCGGCAGTCTT 5707
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| ||||| || ||||| |||||||| |||| || |||||||| | ||| ||
Sbjct 5706 GACAGCAGTATCGATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCCGAGGG 5647
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
||| || | | ||||| ||| ||||| || | ||| ||||||| | ||||
Sbjct 5646 AGTTAGACCACGCAGGTAGGAGTTCTGGACGAATCCTCTAGCCGCGGGCGAGTAGTCGTC 5587
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
||| |||||||| |||| |||| || || | ||| |||| |||||||| || |||||
Sbjct 5586 CTTTGTAAAGTGCGGCAAAGTCCGGTACTTGAATCCGAATGGAATACGCTTACCCTCAAC 5527
Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
| ||| || || | || | ||||||||||||| ||
Sbjct 5526 GGACTGTTGACCGACAAGCGCAGTCATCTGCGAAATGTT 5488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471749599267222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |