Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq147 187 3e-41
seq337 172 7e-37
seq416 147 3e-29
seq3323 116 5e-20
seq1016 116 5e-20
seq3275 114 2e-19
seq1 102 1e-15
>seq147
Length=84644
Score = 187 bits (206), Expect = 3e-41
Identities = 344/498 (69%), Gaps = 10/498 (2%)
Strand=Plus/Minus
Query 1852159 CGCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTG 1852218
||| | ||| || ||||| ||||| || ||||||||||| | || || || ||||
Sbjct 20880 CGCTAGGGCGAAGATCTTCCGCTGATCCACGCCGCCAAACTGCACATCCACATCCAGGTA 20821
Query 1852219 CTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTG-CGGT 1852277
|||||||||||||||||||||||| ||||||| || | | ||| ||||| ||| | ||
Sbjct 20820 CTGCTCGTCGAGGGCCTGCATGAGAGGGTAGATCAGGCCGGACAGTAGCGGATTGTCCGT 20761
Query 1852278 CCATCTTGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGC-CGGTGCGCACG-TGCGCC 1852333
| |||||| |||| || | ||| | | ||| ||||| ||||| || | ||| |
Sbjct 20760 CTG-CTTGACGACCTCGGCACCCGCCCTCTTCGCGTCGTGCTCGGTGGTCATGGTGCTC- 20703
Query 1852334 GCGAGTCGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACA 1852393
|| || | ||||| | | |||| | | |||||||||| |||| ||||
Sbjct 20702 ---AGGCGCAACAGGTCCATCATGTAGTCCGGGGACTTCTGGTACTCGCTGCCCAGCACG 20646
Query 1852394 AACTCGAGTCCGCCCAGCGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCG 1852453
||||| || | | | | || |||||||| | || |||| | ||||| | ||| |
Sbjct 20645 AACTCCAGACGGTCGACCGACACGCCGACGGCCTTGAGCGACTCGGTGATGACGTACTTG 20586
Query 1852454 TACCAGCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCG 1852513
|| | | |||| | ||| || || |||| ||| |||||||||| ||||
Sbjct 20585 TAATACTTGGCGCGGTAATTGACGAGCTCGATGGGCGCCTTCAGGTTGTCGAGGAAGGCG 20526
Query 1852514 TGCACGTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTG 1852573
|| | ||||| | ||||||||||| ||||||||||||| || || | || | |||
Sbjct 20525 TGAATATCGGCCAGCAGGATCTTGACGTGACAGCCGGCCTGCAGGAACTGCGCGATCTTG 20466
Query 1852574 AAGATGGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATG 1852633
| || ||||| |||||||| |||||| |||| |||| ||| || ||||| || ||
Sbjct 20465 AGCATCGGCACGAAGTAGCCGCAGTGCGGCCTGCCGGTCGTCGCGGTACCCCAGTAGATC 20406
Query 1852634 ATCAGGGGGCGCTCGGCC 1852651
| || || |||||| ||
Sbjct 20405 TTGAGCGGACGCTCGCCC 20388
>seq337
Length=168310
Score = 172 bits (190), Expect = 7e-37
Identities = 185/245 (76%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749
|||||| ||| || || |||||| |||||| ||||| |||||||| | |||||||||
Sbjct 158452 CGCCTTCTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGAT 158393
Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809
|||||| | ||| ||||||| || ||||||| ||| | | || |||| | |
Sbjct 158392 GTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCAC 158333
Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869
||||||||||| || || ||||||||||||||||||||||| ||||||||||| |
Sbjct 158332 CAGCAGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCGTTCATGCCAAG 158273
Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| || || || || | || | | ||||| |||||||||||||| |||||| |||
Sbjct 158272 AAGAGCGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGAT 158213
Query 868930 GATCT 868934
|||||
Sbjct 158212 GATCT 158208
Score = 109 bits (120), Expect = 7e-18
Identities = 175/251 (70%), Gaps = 3/251 (1%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|| ||||||||||| || |||||||| ||||| ||| | |||| | | |||
Sbjct 157801 GAATGGATGTTCTCCATCATAATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGG 157742
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || | ||||||||| |||||||||||| ||||||||
Sbjct 157741 ACCTCGGAGCTGAAGCGTTCGACGAGGTTCTCGTTCACGATGCCGTCAGACGCGGCGAAG 157682
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGTGG 869809
||||| |||||||| ||| ||| ||||||||| ||| ||| || ||||| |
Sbjct 157681 AAAGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCATCGTTGAGGCGCTTGTTCCAGTCG 157622
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | || || | |||||| || ||||||| || ||||||||||| |||
Sbjct 157621 TGAAGATCCTTGGAAAGATCAATCTCCTCAGCAGTCCAGAAAGAAGCCTCGGCCTTCTTG 157562
Query 869870 TACATCTCCCA 869880
||||||| |||
Sbjct 157561 TACATCTGCCA 157551
Score = 87.8 bits (96), Expect = 2e-11
Identities = 114/156 (73%), Gaps = 9/156 (6%)
Strand=Plus/Minus
Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAG 869278
|| ||||||||||| |||||||||||||| || |||| | |||| ||| ||| |||
Sbjct 158097 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAG 158038
Query 869279 ATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG 869338
|| ||||||||||| || || | ||||| ||| || ||| |||||| | ||||
Sbjct 158037 ATACCCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAG--GTCGAG----TTCTTG 157984
Query 869339 T---TGATCCACTTCATCGCCCAGTCGGCCTTTTTC 869371
| |||||| | |||||||||||||| |||
Sbjct 157983 TCGCAGATCCAACGAAGGGCCCAGTCGGCCTTCTTC 157948
>seq416
Length=77619
Score = 147 bits (162), Expect = 3e-29
Identities = 99/111 (89%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||||||||| ||| | || |||||| |||| |||||| |||||||||||
Sbjct 60434 GCCGCCAACTACCTCGACATTAAGGCACTTCTCGATGTTGGCTGCAAGACTGTGGCCAAC 60375
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| ||||| |||||||||||||| || |||||| ||
Sbjct 60374 ATGATCAAGGGCAAGTCTCCCGACGAGATCCGCAAGACTTTCAACATCCAG 60324
>seq3323
Length=107137
Score = 116 bits (128), Expect = 5e-20
Identities = 141/190 (74%), Gaps = 3/190 (2%)
Strand=Plus/Plus
Query 1726965 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 1727024
|||| | ||| |||||| || |||||||||||| |||||||| ||||| ||||| ||||
Sbjct 35279 CGTCAATGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGA 35338
Query 1727025 CATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCA 1727084
||||||||||||| | ||| ||| || ||| | || | |||| | | ||| ||
Sbjct 35339 GGTAGGCGCGCATGATGATGCACAGCTCGCCGCTCAGCT--TATCGG-CCAGGGCCTTCA 35395
Query 1727085 GGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144
|||| || | || |||||| ||| |||||||||| ||| || || || || || |
Sbjct 35396 GGCGCTGGGCGTACTCGACGGCGGTTTCCGGGTCGTGGATCGAGCAGGGGCCGACCATGA 35455
Query 1727145 CCAGCAGCCG 1727154
||||||| ||
Sbjct 35456 CCAGCAGACG 35465
>seq1016
Length=154321
Score = 116 bits (128), Expect = 5e-20
Identities = 254/370 (69%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 1726674 ATAGAAAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCC-ACGCTC 1726732
|||| ||| ||||| || | |||||| | |||||||| || || || | | |
Sbjct 22963 ATAGGAAGTGGTGCGGGTGCTGGACGGCGCCGATGGCGTCGA-TGGCGACGTCGAAGGAG 23021
Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792
|||||||||||||| |||||||||| || | | ||| | || |||| ||||||||||
Sbjct 23022 CCGTCGGTGCCGTTTTTGAAGCCGACGGGGAAGGACAGGCCGGAGGCCAGCTCGCGGTGC 23081
Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA- 1726851
| |||||||||||| ||||||||||| | |||||| | | |||||| || | ||
Sbjct 23082 AGCTGGCTCTCGGTGGTGCGCGCGCCAATGGCGCCGACGGTGATCAGGTCGGCGAGGTAC 23141
Query 1726852 AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCG-ACGACGA 1726910
| ||| | | | | || | |||| ||| | |||| || | | ||| || | |
Sbjct 23142 TGCGGCGAGATGGTGTC-CAGCATCTCGCTGGCGATGGGC--AT-GCCAGCGTTCGTC-A 23196
Query 1726911 GATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGA 1726970
| ||| |||| | |||||| | || || | | | | | || |||||
Sbjct 23197 GGTCGACGAACATCTGCCGCGACACGCGGAGCCCTTTGTTGATCTTGAAGGAGTTGTCGA 23256
Query 1726971 GGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGG 1727030
|||||||||| || ||||||||||| |||||||| || | ||||| |||| |||||
Sbjct 23257 TGTCGGGGTCGTTGATGAGGCCCTTCCAGCCGACGGTTGTTCTGGGCTTCTCGAGATAGG 23316
Query 1727031 CGCGCATGAC 1727040
||||||| ||
Sbjct 23317 CGCGCATCAC 23326
Score = 100 bits (110), Expect = 3e-15
Identities = 109/144 (76%), Gaps = 8/144 (6%)
Strand=Plus/Plus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTC----GCAACGTGCCGGCAGGCCTC 19100
|||||||||| |||||||| ||| || |||||| | ||||| || | |||||
Sbjct 26866 AGGACAGCATTGGCGGCACTGTG----GCTTGTGTCATCAGAAACGTCCCCACTGGCCTG 26921
Query 19101 GGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCG 19160
|| |||||||||||||||||| | || || ||| ||||| ||||||||| || ||
Sbjct 26922 GGTGAGCCGTGCTTTGACAAGCTTGAAGCGAAGCTTGCCCATGCCATGCTGAGCATACCT 26981
Query 19161 GCCACCAAGGGATTCGAGATTGGC 19184
|| ||||| || || |||||||||
Sbjct 26982 GCGACCAAAGGGTTTGAGATTGGC 27005
Score = 91.5 bits (100), Expect = 2e-12
Identities = 202/299 (68%), Gaps = 8/299 (3%)
Strand=Plus/Plus
Query 18120 CGTCGGCTGC-ATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCC 18178
|||||| ||| ||| ||||||| || ||| || | | || ||||| | || || |
Sbjct 26185 CGTCGG-TGCTATCGTCGACGGTTGTCCTCCGGGCCTACGCCTCACCGAGACGGATATTC 26243
Query 18179 AGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGC 18238
|||| || || || ||||| || || || |||| | ||||||| ||||| |||
Sbjct 26244 AGCCGCAACTGACACGACGCCGCCCCGGTCAAAGCGCCATCACCACGCCACGCAATGAGA 26303
Query 18239 CCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCG 18298
|| |||||| |||||||||||||||||| |||| |||| || ||| | || |||
Sbjct 26304 AAGACCGCGTCGAAATCCAGTCGGGCACGGAGTTCGGCGTCACTCTGGGCACCCCTATCG 26363
Query 18299 GCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGG--- 18355
|||| |||| || ||||||| |||| |||||| | ||| | | ||
Sbjct 26364 GCCTGCGTGTGATGAATGAGAACCAGCGCCCCGGAGACTATGGCAACAAGACGATGGATC 26423
Query 18356 TG---CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCG 18411
|| || |||| ||||| || | || ||| ||| || |||||| ||||||||
Sbjct 26424 TGTATCCCAGGCCTAGCCACGCTGATTGGACGTACCTGGAGAAATACGGCGTCAAGGCG 26482
>seq3275
Length=110439
Score = 114 bits (126), Expect = 2e-19
Identities = 150/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 18093 CACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTG 18152
|| || ||||||||| ||| | ||| || ||||| |||||||| || ||| |
Sbjct 98105 CAGCTATGGCGAGTCACACTGCCTCTCCGTTGGTTGCATTGTCGACGGCTGCCCTCCGGG 98046
Query 18153 CATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGG 18212
||||| || | ||||||||||||||||| ||| || || || || ||||||||| |
Sbjct 98045 CATGCAGCTCACTGAGGCCGACATCCAGCCCCAGATGACCCGCCGTCGGCCGGGCCAGAG 97986
Query 18213 CGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAA 18272
|||| | |||| || ||||||||| ||||| || ||||| || ||||| |||
Sbjct 97985 CGCAATCACCACACCTCGCAACGAGAAGGATCGTGTGGAAATCCAATCCGGCACCGAGTT 97926
Query 18273 CGGCCTCACGCTCGGCTCGCCCGTCGGC 18300
||| ||||||| || ||||| | |||
Sbjct 97925 TGGCGTCACGCTGGGAACGCCCATTGGC 97898
Score = 104 bits (114), Expect = 3e-16
Identities = 119/159 (75%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103
|| || ||||| || ||||| |||| || ||| || || ||||| | || |||||
Sbjct 97425 GAAGATAGCATTGGGGGCACTGTGAGCTGTGTGATCCGTAATGTGCCATCTGGTCTCGGT 97366
Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163
||||| ||||| |||||| | ||||| ||| || || |||||||| |||||||||
Sbjct 97365 GAGCCTTGCTTCGACAAGCTTGAGGCAATGCTTGCGCATGCCATGCTCAGTATCCCGGCC 97306
Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTT-GCGGGTGC 19201
|| ||||| |||||||||||| || ||| |||| |||
Sbjct 97305 ACGAAGGGCTTCGAGATTGGCTCAGGTTTTGGCGGTTGC 97267
>seq1
Length=193982
Score = 102 bits (112), Expect = 1e-15
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| |||||||| || |||| ||| | || |||||||| || | ||||||||||
Sbjct 92998 CTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATAGGGATGAGGCCGTTGCT 93057
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||| || || || | |||| ||| | ||| || | ||| || | ||
Sbjct 93058 GGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGAACGTTCAGACC 93117
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || ||||| | ||||||||| | || || || || ||||||||||| |||||
Sbjct 93118 GATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCTTCAGGGTGTCGTAGATACCCTC 93177
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGA 1630280
|| || |||||||||| | ||| ||||| ||
Sbjct 93178 AATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGA 93213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106843274753102
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