Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq114 82.4 5e-11 >seq114 Length=54951 Score = 82.4 bits (90), Expect = 5e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||||||||| || || |||||||| ||||| || ||||| |||| || | || Sbjct 54925 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGC 54866 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGCAATTTT 33665 || ||||| ||||||| |||||||| || | || | || || |||| | | | || Sbjct 54865 TTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 54806 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || || || | ||| | ||||||||| || || || || | ||||| || || || | Sbjct 54805 CTCTT--GACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAG 54748 Query 33725 T 33725 | Sbjct 54747 T 54747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328689554075520