Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq337 98.7 9e-16 >seq337 Length=168310 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/229 (72%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104 ||||| || ||| ||||| |||||||| | || | || || |||||||| | || || Sbjct 158219 GAGGCTGTCGAG-ATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGG 158277 Query 47105 CATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGC 47163 ||||||||| || || |||||| | || || ||||| || || || || ||| ||||| Sbjct 158278 CATGAACGCGACTCTC-ATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGG 158336 Query 47164 AGCTCGGACAAC-CGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACA 47220 ||| || |||| ||| || | || |||| || || || || || ||| | |||| Sbjct 158337 CGCT-GGGCAACAAGAAGTACTACAA--CTCGACCAACCCCTTCGACTTCATGGAGAACA 158393 Query 47221 TTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | |||||| | ||||| || || || |||||||| || || || || || Sbjct 158394 TCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 158442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476589716750160