Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq1393 109 6e-19
>seq1393
Length=54601
Score = 109 bits (120), Expect = 6e-19
Identities = 190/271 (70%), Gaps = 4/271 (1%)
Strand=Plus/Minus
Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183
|||||||| || ||||| ||||| ||||||||| || ||||| || | |
Sbjct 42649 ATGTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATG 42590
Query 147184 AGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCAC 147242
| || | | || | || || |||||| || ||||| || | |||||| |||||
Sbjct 42589 ATGCGGC-GATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCAC 42531
Query 147243 GCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301
|| || |||| ||||| ||| ||| |||||||||| || || ||||||| |||||
Sbjct 42530 ACCTTGTCCCCTGTAGTCCGTCGTCGC-GTCCACGTACTCAGCGCCGAAGTGCCGCCACT 42472
Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGA 147361
|||||||||| || || || |||||||| || | |||||||| ||| | | | ||
Sbjct 42471 GGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGA 42412
Query 147362 GAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
| |||||| | || |||| | ||||||||
Sbjct 42411 GGAACTCGCGCGATCCGTTACCATCCCAGAT 42381
Score = 105 bits (116), Expect = 8e-18
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965
||| ||| | ||||| | || ||||||| |||||| ||||||||||| |||| |||||
Sbjct 42924 CCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGT 42865
Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025
|| | ||||| | || || || ||||||| ||||| |||||||| | ||
Sbjct 42864 GCGTGAGTGTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGT 42805
Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGC 147081
| || ||||||||||| || |||| ||||||||| | |||| |||||| |||
Sbjct 42804 ACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGC 42749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583461699278400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |