Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq114 116 3e-21 seq3263 84.2 2e-11 >seq114 Length=54951 Score = 116 bits (128), Expect = 3e-21 Identities = 133/176 (76%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| |||| || || || |||| || |||||||| || Sbjct 54919 GTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 54860 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || |||| ||||||||||||| |||| || |||||||||| |||||| ||| Sbjct 54859 GCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 54800 Query 35660 AGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | |||| | | ||||||||||| || ||||| | ||||| || || || |||| Sbjct 54799 AC-GTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCA 54745 >seq3263 Length=93059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || || || | || || |||||||| ||||| || Sbjct 35722 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 35781 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 |||| ||||||||||||| |||| || ||||||||| Sbjct 35782 GATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 35820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450773280478480