Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq337 89.7 7e-13 >seq337 Length=168310 Score = 89.7 bits (98), Expect = 7e-13 Identities = 299/459 (65%), Gaps = 20/459 (4%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 ||| || ||| || ||||| ||||||||||| |||||||| || || || ||||| | Sbjct 158461 CATGACACCCGCCTTCTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTT 158402 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 | || || || |||||||| || || || || || | || || | || || || Sbjct 158401 GAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCC 158342 Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT-TCACAAT 39491 | | | || | || ||||| || || ||||| ||| | || | | Sbjct 158341 CAGCGCCACCAGCAGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCG-T 158283 Query 39492 TCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGG 39551 |||| || | || || || ||||| ||||| || ||||| || ||||| || || | Sbjct 158282 TCATGCCAAGAAGAGCGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAG 158223 Query 39552 CCTCTGTTATTATCGATGTTACTACCTCATC--ACTCGGTG----GATGCAA-TAAATGT 39604 |||| || || ||| || |||| | | |||| | | | | | | |||| Sbjct 158222 CCTCGGTGATGATC----TT-----CTCAACGGATTCGGGGCTGGGCTTCGACTTGATGT 158172 Query 39605 TTAA--ACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662 | ||| | |||||||||||| ||| | ||||||||| | | || | || | Sbjct 158171 GCGAGAACAGCAGGCAGGCGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCAT 158112 Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG 39722 | || || || | |||||||| || |||||||| |||||||| || |||| || |||| Sbjct 158111 TGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAG 158052 Query 39723 ATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761 | || |||||||| || || || || || || |||| Sbjct 158051 AGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAAGCAA 158013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686877837585840