Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 6e-13
seq337 86.0 8e-12
>seq1
Length=193982
Score = 89.7 bits (98), Expect = 6e-13
Identities = 296/458 (65%), Gaps = 2/458 (0%)
Strand=Plus/Plus
Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301
|| || || ||||| ||||| ||||| | | |||||||| | ||||| ||
Sbjct 92519 GACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTTCGCAGCAC 92578
Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361
| |||||| || ||| || || | ||||| ||||| ||||| |||||| |||
Sbjct 92579 AGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCC 92638
Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-C 111420
||||| | |||| |||| | || || || ||| | | ||| || || | ||| | |
Sbjct 92639 TTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGCGTACCAGAGC 92698
Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 111480
|| | | || ||| | || | || |||||| ||| |||| |||||||||
Sbjct 92699 TTCTGAGCACGG-ACAGTCTCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGC 92757
Query 111481 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 111540
|| || |||||||| |||||| ||||| || || || || || | || |
Sbjct 92758 CTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGT 92817
Query 111541 CCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 111600
||| || | |||||| ||||||||||| || || |||||||| || | | ||
Sbjct 92818 CCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAA 92877
Query 111601 GAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 111660
|| || | | ||| |||| || | || ||||| || | || || || |
Sbjct 92878 AAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAA 92937
Query 111661 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAG 111698
|| ||| || ||||| ||||| || |||| |||| ||
Sbjct 92938 GACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAG 92975
>seq337
Length=168310
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
|||||||| || || || || ||||| ||||| | ||| |||||||| || ||||||
Sbjct 158136 CCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTC 158077
Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
|| | ||| |||| | | ||| || ||| ||||||||||||||| || ||| ||
Sbjct 158076 TTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAA 158017
Query 122797 GCAAAAAGGCGTTCGGCGAAGG 122818
|||| ||||| |||||||
Sbjct 158016 GCAATGAGGCGCGATGCGAAGG 157995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628003691457600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |