Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 >seq1 Length=193982 Score = 143 bits (158), Expect = 3e-29 Identities = 1041/1661 (63%), Gaps = 37/1661 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| ||||| || ||||| | |||||||||||||| || |||||||| | Sbjct 91608 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 91667 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | ||||||| || | ||||| |||| | |||| | || || | |||| Sbjct 91668 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 91727 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || || | || |||||||||||||| || || || || ||||| | || | Sbjct 91728 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 91787 Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 | | | || | | ||||| || ||| ||||||| ||| || |||||||||| Sbjct 91788 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 91844 Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 | | ||| | || || || || | | ||| | | |||||| | | | Sbjct 91845 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 91904 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161 |||| || || | | ||| |||| || ||| | |||||||| || |||| Sbjct 91905 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 91964 Query 118162 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220 | |||||| || | ||| ||||| || | || || ||||| || ||||||||| | Sbjct 91965 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 92022 Query 118221 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 || ||| | ||||| | ||||| |||||||| || || | ||| | | ||| ||| Sbjct 92023 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 92082 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCC 118338 ||| | | ||| |||| | ||| ||||||||| || | | | | Sbjct 92083 ACCGTGCTGGGCAATCTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCT 92141 Query 118339 CCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 118398 | |||||| ||| | || || || || |||||||| || |||| || || || | Sbjct 92142 TATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGT 92201 Query 118399 ATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455 | ||||| || || || | || ||| || ||| || ||||| || || | Sbjct 92202 AAGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAG 92258 Query 118456 TTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 118515 | || || || || |||| ||||||||| ||||| |||| | || Sbjct 92259 TCTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAG 92318 Query 118516 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 118575 || || | || || ||||| | |||||| | | || || || || | ||| || Sbjct 92319 CAAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGC 92378 Query 118576 ACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 ||||| || ||| | | || || || | || || | | | || ||||| ||| Sbjct 92379 TCTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTG 92437 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTC 118690 | |||| || | || |||||||| | | | || | | || | ||| | Sbjct 92438 ACAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGAC 92493 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 || ||| | | || || || | ||||| | || ||||||| | ||||| | | Sbjct 92494 ATCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGC 92553 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 |||||||| | ||||| ||||| ||| || || ||||||||| | |||||| || Sbjct 92554 GGTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTG 92613 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| || |||||||| | |||| | || | || || || || Sbjct 92614 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTG 92673 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929 || || ||| || || | ||||| | || | ||| | ||||| || | || |||| Sbjct 92674 GGCCTCGAGGATCGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACCCT 92732 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 | | ||| |||| ||||||||| || || || ||||| | | || | || || | Sbjct 92733 CCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAG 92792 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | || | ||||| | ||| | ||| || || |||||| ||||||||||||| Sbjct 92793 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 92852 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 | || || |||||||| || |||| || || ||| |||| | || || | || || | Sbjct 92853 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 92912 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | ||| | || | |||| | || ||| || |||||||| || ||||| | |||| Sbjct 92913 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 92972 Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 | || || |||| |||||| || || | |||||| ||| | |||| Sbjct 92973 AAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACAC 93032 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATT 119284 | ||||| || |||| || | | ||| || || || ||| | || | | Sbjct 93033 GGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAAT--GTAGCTGCCAGT 93090 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 ||| | || ||| | || || ||| ||||| || || ||| ||||| || || Sbjct 93091 GGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACA 93150 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | | || || ||||||| || || || || |||| | ||||||||||||| Sbjct 93151 GGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCA 93210 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445 | || |||||| |||| |||||||| ||||| |||| Sbjct 93211 AGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAGAG 93251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618407324033360