Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 3e-29
>seq1
Length=193982
Score = 143 bits (158), Expect = 3e-29
Identities = 1041/1661 (63%), Gaps = 37/1661 (2%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| ||||| || ||||| | |||||||||||||| || |||||||| |
Sbjct 91608 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 91667
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| ||||||| || | ||||| |||| | |||| | || || | ||||
Sbjct 91668 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 91727
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| || | || |||||||||||||| || || || || ||||| | || |
Sbjct 91728 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 91787
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
| | | || | | ||||| || ||| ||||||| ||| || ||||||||||
Sbjct 91788 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 91844
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101
| | ||| | || || || || | | ||| | | |||||| | | |
Sbjct 91845 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 91904
Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161
|||| || || | | ||| |||| || ||| | |||||||| || ||||
Sbjct 91905 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 91964
Query 118162 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220
| |||||| || | ||| ||||| || | || || ||||| || ||||||||| |
Sbjct 91965 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 92022
Query 118221 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279
|| ||| | ||||| | ||||| |||||||| || || | ||| | | ||| |||
Sbjct 92023 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 92082
Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCC 118338
||| | | ||| |||| | ||| ||||||||| || | | | |
Sbjct 92083 ACCGTGCTGGGCAATCTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCT 92141
Query 118339 CCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 118398
| |||||| ||| | || || || || |||||||| || |||| || || || |
Sbjct 92142 TATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGT 92201
Query 118399 ATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455
| ||||| || || || | || ||| || ||| || ||||| || || |
Sbjct 92202 AAGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAG 92258
Query 118456 TTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 118515
| || || || || |||| ||||||||| ||||| |||| | ||
Sbjct 92259 TCTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAG 92318
Query 118516 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 118575
|| || | || || ||||| | |||||| | | || || || || | ||| ||
Sbjct 92319 CAAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGC 92378
Query 118576 ACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634
||||| || ||| | | || || || | || || | | | || ||||| |||
Sbjct 92379 TCTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTG 92437
Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTC 118690
| |||| || | || |||||||| | | | || | | || | ||| |
Sbjct 92438 ACAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGAC 92493
Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750
|| ||| | | || || || | ||||| | || ||||||| | ||||| | |
Sbjct 92494 ATCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGC 92553
Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810
|||||||| | ||||| ||||| ||| || || ||||||||| | |||||| ||
Sbjct 92554 GGTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTG 92613
Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|| ||| ||| || |||||||| | |||| | || | || || || ||
Sbjct 92614 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTG 92673
Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929
|| || ||| || || | ||||| | || | ||| | ||||| || | || ||||
Sbjct 92674 GGCCTCGAGGATCGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACCCT 92732
Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989
| | ||| |||| ||||||||| || || || ||||| | | || | || || |
Sbjct 92733 CCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAG 92792
Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049
| || | ||||| | ||| | ||| || || |||||| |||||||||||||
Sbjct 92793 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 92852
Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109
| || || |||||||| || |||| || || ||| |||| | || || | || || |
Sbjct 92853 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 92912
Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169
| ||| | || | |||| | || ||| || |||||||| || ||||| | ||||
Sbjct 92913 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 92972
Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226
| || || |||| |||||| || || | |||||| ||| | ||||
Sbjct 92973 AAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACAC 93032
Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATT 119284
| ||||| || |||| || | | ||| || || || ||| | || | |
Sbjct 93033 GGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAAT--GTAGCTGCCAGT 93090
Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344
||| | || ||| | || || ||| ||||| || || ||| ||||| || ||
Sbjct 93091 GGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACA 93150
Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404
| | || || ||||||| || || || || |||| | |||||||||||||
Sbjct 93151 GGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCA 93210
Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445
| || |||||| |||| |||||||| ||||| ||||
Sbjct 93211 AGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAGAG 93251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618407324033360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |