Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10- 07] 3,606 sequences; 45,587,513 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 206 3e-48 >seq1 Length=193982 Score = 206 bits (228), Expect = 3e-48 Identities = 344/491 (70%), Gaps = 6/491 (1%) Strand=Plus/Minus Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353 |||||||| |||||||| | |||||| || | |||||||| | | |||||| Sbjct 93249 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 93190 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || || || || |||||||| || || ||| |||||| ||||||||| Sbjct 93189 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 93130 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471 | |||||||||||| | || | || | || ||||||| | |||| || | Sbjct 93129 GCCGGTGGTATCGGTCTGAAC-GTTC-ACCGCATCCGTGCCACTGGCAGCTACATTGCCG 93072 Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531 | || |||||| | | | || || | ||||||||||| || | ||||||||| |||| Sbjct 93071 GTACTAACGGCACCAGCAACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 93012 Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591 | ||||| ||||||||||| |||||| || | |||||||||||||||||||||| Sbjct 93011 GCTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGT 92952 Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651 |||| || || | | |||||||| || ||| ||| || || | || ||| | | Sbjct 92951 GGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTC 92892 Query 53652 GCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710 || |||||||| || ||| ||||| |||||||| || ||||||||| | || ||| Sbjct 92891 GCGCTCGTGACCTTTTCTAC-GCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAG 92833 Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTAC 53770 || ||| ||| ||| |||||||| ||||||||||| || || | ||||| Sbjct 92832 CAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTAT 92773 Query 53771 GGTGAGGAGTT 53781 |||||||| || Sbjct 92772 GGTGAGGAATT 92762 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| | | ||| ||| || |||||| || | ||| | | || | ||| | Sbjct 91832 TCAAGGCGCTCTACAAGACCGTCTGGGAGCTTTCCCAGCGCACCATCGTTCAGATGGCCG 91773 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || |||||||||| |||||| || || ||||| || || ||| |||| || | || Sbjct 91772 CCGACCGTGGTGCGTTCATCGATCAATCGCAGTCCCTCAATATCCACATGAAGGACCCCA 91713 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | ||| |||| | | |||||||||||| || |||||| || |||||||| || | Sbjct 91712 CGATGGGCAAGATCACCTCGATGCACTTCGCTGGTTGGAAGCTTGGCCTCAAGACCGGCA 91653 Query 55908 TGTACTATCTGCGGACCC 55925 ||||||| || || |||| Sbjct 91652 TGTACTACCTCCGCACCC 91635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547191334238800