Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 206 3e-48
>seq1
Length=193982
Score = 206 bits (228), Expect = 3e-48
Identities = 344/491 (70%), Gaps = 6/491 (1%)
Strand=Plus/Minus
Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353
|||||||| |||||||| | |||||| || | |||||||| | | ||||||
Sbjct 93249 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 93190
Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413
|| || || || || |||||||| || || ||| |||||| |||||||||
Sbjct 93189 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 93130
Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471
| |||||||||||| | || | || | || ||||||| | |||| || |
Sbjct 93129 GCCGGTGGTATCGGTCTGAAC-GTTC-ACCGCATCCGTGCCACTGGCAGCTACATTGCCG 93072
Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531
| || |||||| | | | || || | ||||||||||| || | ||||||||| ||||
Sbjct 93071 GTACTAACGGCACCAGCAACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 93012
Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591
| ||||| ||||||||||| |||||| || | ||||||||||||||||||||||
Sbjct 93011 GCTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGT 92952
Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651
|||| || || | | |||||||| || ||| ||| || || | || ||| | |
Sbjct 92951 GGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTC 92892
Query 53652 GCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAG 53710
|| |||||||| || ||| ||||| |||||||| || ||||||||| | || |||
Sbjct 92891 GCGCTCGTGACCTTTTCTAC-GCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAG 92833
Query 53711 AAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTAC 53770
|| ||| ||| ||| |||||||| ||||||||||| || || | |||||
Sbjct 92832 CAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTAT 92773
Query 53771 GGTGAGGAGTT 53781
|||||||| ||
Sbjct 92772 GGTGAGGAATT 92762
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||| | | ||| ||| || |||||| || | ||| | | || | ||| |
Sbjct 91832 TCAAGGCGCTCTACAAGACCGTCTGGGAGCTTTCCCAGCGCACCATCGTTCAGATGGCCG 91773
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
| || |||||||||| |||||| || || ||||| || || ||| |||| || | ||
Sbjct 91772 CCGACCGTGGTGCGTTCATCGATCAATCGCAGTCCCTCAATATCCACATGAAGGACCCCA 91713
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| ||| |||| | | |||||||||||| || |||||| || |||||||| || |
Sbjct 91712 CGATGGGCAAGATCACCTCGATGCACTTCGCTGGTTGGAAGCTTGGCCTCAAGACCGGCA 91653
Query 55908 TGTACTATCTGCGGACCC 55925
||||||| || || ||||
Sbjct 91652 TGTACTACCTCCGCACCC 91635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547191334238800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |