Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307885.1_202015-10-
07] 3,606 sequences; 45,587,513 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq114 123 6e-23
>seq114
Length=54951
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| ||| | ||| | |||||
Sbjct 54651 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCATCC 54592
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || || || || ||||| |||||||||||
Sbjct 54591 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCC 54532
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || | || || || | ||||| |||
Sbjct 54531 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTC 54472
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 54471 TTGCCGGT 54464
Score = 118 bits (130), Expect = 3e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||||||| || || |||| ||||| |||| || ||| | || ||
Sbjct 54934 AGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCC 54875
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || || || ||||| || ||||| || ||||||||
Sbjct 54874 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 54815
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| | || || || | ||||| |||
Sbjct 54814 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCGAGGGTGATGGTC 54755
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 54754 TTGCCAGTCA 54745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192476102822564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |