Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 98.7 1e-15
>seq1094
Length=88458
Score = 98.7 bits (108), Expect = 1e-15
Identities = 266/402 (66%), Gaps = 4/402 (1%)
Strand=Plus/Minus
Query 66475 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 66534
|||| ||||||||||| || | || || | |||||||| |||||||| || |
Sbjct 24839 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 24780
Query 66535 CTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 66593
| || || || | ||||| || || || |||||||| | ||| ||||| || || ||
Sbjct 24779 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 24721
Query 66594 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 66653
| | ||| || || | | ||| || | || | ||| || ||||| || ||
Sbjct 24720 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 24661
Query 66654 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 66713
| ||| ||||| || || || | ||| | |||||||| | || | |||||
Sbjct 24660 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 24601
Query 66714 ACTACATCCATGGTAATACTTGAA-ATAATCGGAGAATGTTTCCCATTTTTAGGATTGAC 66772
|| | || | || | |||| | || || ||||| ||||||| ||||| || |||||
Sbjct 24600 ACAATTTCGAATGTC-TCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 24542
Query 66773 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 66832
||||||| | | ||| | || || | |||| | || || || | ||||| || ||
Sbjct 24541 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 24482
Query 66833 TGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
|| ||||| || | || || | |||||| || || |||||
Sbjct 24481 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 24440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658128537879200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |