Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 127 3e-24
>seq1094
Length=88458
Score = 127 bits (140), Expect = 3e-24
Identities = 351/530 (66%), Gaps = 6/530 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||||| | || ||||| | || |||||| | ||||||| || || | ||
Sbjct 25076 ACTAACGGCACCAGCAACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCC-CG 25134
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| || || || || || || ||| | ||| ||||| | || || ||
Sbjct 25135 CTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGTG 25194
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||| || || || || |||| |||| | || || ||| || || |||| ||
Sbjct 25195 GCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTCG 25254
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | ||| | || || || |||||| | || ||| | ||||||||||| || | |
Sbjct 25255 CGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGCA 25314
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| ||||| ||| |||||||| || || || ||||| |||| || ||
Sbjct 25315 GAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTATGG 25374
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAG 97164
|| || || |||||| ||| | || ||| | ||||| || || ||||| |
Sbjct 25375 TGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGAGAC-TG 25433
Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| ||| | |||| || ||| | || ||| | ||| ||||| || || || | ||
Sbjct 25434 TCCGTGCTC-AGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTAACCCC 25492
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| ||| | |||||||| | || ||||| |||||||| || | ||||||||
Sbjct 25493 TTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATT 25552
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGA 97333
||||||| |||||| ||||| || |||||| || |||| || ||
Sbjct 25553 CGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACCGCTCCTGATGA 25602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741009363768800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |