Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1094 345 1e-89 >seq1094 Length=88458 Score = 345 bits (382), Expect = 1e-89 Identities = 997/1512 (66%), Gaps = 38/1512 (3%) Strand=Plus/Plus Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||||||||| |||| || || ||| || |||||||||| || | | ||||||| Sbjct 24897 TGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAGG 24956 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | ||| ||| |||||||||| ||||| || |||| ||||| | || ||||||| | Sbjct 24957 AGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACCG 25016 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | || || || ||| | | || || || | ||||| || | ||| |||||| ||| Sbjct 25017 CCGGTGGTATCGGTCTGAACGTTC-ACCGCATCCGTGCCACTGG-CAGCTACATTGCCGG 25074 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || | || || || | || ||||| ||||||| |||| ||||| | Sbjct 25075 TACTAACGGCACCAGCAACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCCG 25134 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||||||||| |||||| || || || || || || |||||||| Sbjct 25135 CTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGTG 25194 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 ||||| ||| | || ||||| || ||||| || ||| ||||||||||| | || Sbjct 25195 GCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTCG 25254 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || ||||| || ||||| || || ||| || | || | || |||||||| || ||| | Sbjct 25255 CGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAG-C 25313 Query 363987 AGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || | | ||| | ||| | ||||| |||| || || |||||| |||| || | | Sbjct 25314 AGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTATG 25373 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 |||| || | | || || ||||| ||||||| |||||| | ||| |||| Sbjct 25374 GTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCGAGACTG 25433 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 | | || |||||||| |||| || ||| | || | ||| | || || || | |||| Sbjct 25434 TCCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCCCAGGTCGAAACCGGTAACCCCT 25493 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 ||||||||||| || |||||||||||| ||||||| || ||||||| || |||| Sbjct 25494 TCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATTC 25553 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | || |||||| || ||| || | || ||||||||||| || || || || Sbjct 25554 -GTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACCGCTCCTGATGAAGTCGCTGTG 25612 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTT------TGTAAAAGATGGTACTTTTGAC 364338 || ||| | ||||| | ||||| || | || ||| | || ||| | ||| Sbjct 25613 TGCAACTTAGCGTCTCTGGCGCTACCCACCTTCGTCGATGTCGAGGAAGGTGTCTACGAC 25672 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTG----CAATCTCGACAAGGTTAT 364394 | || | ||| | || || || ||| | | |||| ||||| ||||| | || Sbjct 25673 TTCAAGAAGCTTCACGAGGTTAC---TCA-GGTGCTTGTCAAGAATCTGAACAAGATCAT 25728 Query 364395 CGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || | || ||| |||| |||||| | || |||||||| || || || Sbjct 25729 TGACATTAACCACTACCCAGTTCCAGAAGCCAGGAAGAGCAACATGCGTCACCGTCCTAT 25788 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTTGAT 364512 | | ||||||| | || || ||||||| ||| | ||||| ||| | || ||| Sbjct 25789 CGCTGTTGGTGTCAACGGTCTTGCTGACGCTTTCCT--TGCTCTTCGTATGCCGTTCGAT 25846 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || ||||| || || || | | ||||| || || || || || || | Sbjct 25847 TCTCCTGAGGCCAAGCAGCTGAACATTCAAATCTTCGAGACTATCTACCACGCTGCTCTC 25906 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 ||||| ||| ||| | || || | | || ||| || | |||| |||| Sbjct 25907 ACTGCCTCGGTTGAGCTCGCCAAGAGGGACGGCCCTTACGAAACGTTCCAGGGCAGCCCT 25966 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 || ||||||| | || | ||| | |||||| || || | | || ||| || Sbjct 25967 GCGTCCCAGGGAATTCTGCAATATGACATGTGGAATAAGACCCCCACCGACCTCTGGGAC 26026 Query 364693 TGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTA 364747 ||||| | ||| | | || | || |||| ||||| ||||||||| |||||| Sbjct 26027 TGGGACA-GCTTGAAG-GCCGAGATTGCCCAGCACGGTACCCGCAACTCCTTGCTCGTT- 26083 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || || |||||||| || || || ||||| ||||| ||| ||||| ||||| | Sbjct 26084 --GCTCCAATGCCCACTGCCTCGACCAGCCAGATTCTCGGCTTCAATGAGTGTTTCGAGC 26141 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | ||| || | || || ||||| || || |||| ||||| | ||| || || Sbjct 26142 CTTATACCTCAAACATCTACTCTCGCCGTGTCCTCGCCGGTGAATTCCAGGTTGTCAACC 26201 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAACTAT 364926 || || | ||||| || |||| ||| |||||| ||| ||| ||||||||| Sbjct 26202 CGTGGCTCCTGAAGGACCTCGTTGACCTCGGACTGTGGTCTGATCAG-ATGAAGAACCGC 26260 Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCT 364986 ||||| ||| | || || ||| | ||| | || || | ||||| || | ||| | Sbjct 26261 ATCATTGCCTCCAACGGCTCTATTCAGCAGATCCCCAACATCCCAGATGACATCAAGGCG 26320 Query 364987 ATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGC 365046 | ||||| ||||| ||||| ||||| ||| || || || | ||||| ||||| || Sbjct 26321 CTCTACAAGACCGTCTGGGAGCTTTCCCAGCGCACCATCGTTCAGATGGCCGCCGACCGT 26380 Query 365047 GGTGCTTTTATC 365058 ||||| || ||| Sbjct 26381 GGTGCGTTCATC 26392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303263758207160