Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4076 143 3e-29
seq1227 107 2e-18
>seq4076
Length=19007
Score = 143 bits (158), Expect = 3e-29
Identities = 335/500 (67%), Gaps = 9/500 (2%)
Strand=Plus/Minus
Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158
||||| |||||||||| | |||||| | || | | |||| ||||| |||
Sbjct 10362 AAGAAGGCCGACTGGGCCCTTCGTTGGATCTGCGACAAGAACTCGACCTTCGCATCGCGC 10303
Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218
| | || || ||| || ||||| |||| || ||| ||| ||| |||| ||
Sbjct 10302 CTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTC 10243
Query 46219 TACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278
| |||| | ||| ||||||| || |||| || ||| ||||| || || |||
Sbjct 10242 TGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTCTCGC 10183
Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACA 46336
|| |||||| ||||||| ||||| || || || || | | ||| || || | | |
Sbjct 10182 GATGAGGGCATGCATACCGACTTCGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCC 10123
Query 46337 AGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGT 46396
||| ||||| | || || || ||| ||||| || | || ||||||||||
Sbjct 10122 AGC-----CCCGAATCTGTTGAGAAGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGT 10068
Query 46397 TTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGC-ACAGTCAATGTGCGAC 46455
| | |||| ||| || |||| || || || ||||||||||| || ||| ||||| |
Sbjct 10067 TCCTCACGGACGCTCTCCCCGTCGCTCTTCTTGGCATGAACGCGACTCTCA-TGTGCCAG 10009
Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515
||||||||||| || || ||||| ||||| ||| ||| | | |||| | | ||
Sbjct 10008 TACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAGTACTACAAC 9949
Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575
|| ||| || || || || ||| | |||||||| || | ||||| || || || |||
Sbjct 9948 TCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTC 9889
Query 46576 GAAAAGCGCGTCGGCGAGTA 46595
|| |||||||| || || ||
Sbjct 9888 GAGAAGCGCGTTGGTGACTA 9869
>seq1227
Length=46781
Score = 107 bits (118), Expect = 2e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||| | || | |||||||||||| || |||||||| ||| |
Sbjct 32818 CCACCACGCAGGCGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 32759
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 32758 AGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGA 32699
Query 131128 ATTCCTTCTTTGTCGGT 131144
|| || || ||||| ||
Sbjct 32698 ATGCCCTCCTTGTCTGT 32682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471981057139200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |