Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2279 104 4e-17
seq1386 98.7 2e-15
>seq2279
Length=94676
Score = 104 bits (114), Expect = 4e-17
Identities = 666/1043 (64%), Gaps = 54/1043 (5%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | |||||| ||||| ||||| || || ||| ||| ||
Sbjct 3278 CGCCACTGGATGTACTCGGAGGGGGTAGAGTCCAAGTGGTGGTCGATGTGGGCGAAGGCG 3337
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| | ||| || || || ||||| || | | || ||| ||| ||
Sbjct 3338 TGCTGCTTGATGTAGGCAATACGGATGTTCTCGTGGTGGTAGACCTCACCCGAAGTGGGG 3397
Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| || || || || ||||| |||| ||| |||| |||||| ||||| |||||||||||
Sbjct 3398 ATGAGC-TCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCAGCACCGTTGGGGCCAAT 3456
Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218
||| |||| ||||| | || | | ||| || | | || | |||||| ||||
Sbjct 3457 GACGGCAATACGGGA-GCCAAGAGAGCACTGGAAGGTGATGTCGG---AGATCTG-GGGC 3511
Query 225219 C---AGTTT----GGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271
|| | |||| |||| || | | | | ||||| | |||||
Sbjct 3512 TTGGAGGTACCGGGGTACTGGAAGGTCATGTTGCTGACACGGACAATGGCCTTGGCCTTG 3571
Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTC 225331
| | | |||||| ||||| |||||||||||||||| ||| || | | | |
Sbjct 3572 GTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAACTTGAACTCCATCTCGGAGGCACCG 3631
Query 225332 AGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGG 225391
|| ||||||||||| || || ||| ||||| | || | ||| || ||
Sbjct 3632 AGCTCGTAGTAAGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGATGTTACCACGG 3691
Query 225392 TGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC-GTCAA 225449
| | ||||||||| | || |||| || | || ||| | | || ||| |
Sbjct 3692 TAACGCTTGAGCTTGAAGCGCT---CGTAGTGGATAACGTGCTGG--ATGGTGTTGTCCA 3746
Query 225450 GGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTGAGGT 225506
||| ||||||||||| | |||||||| | || | | || | | |||||
Sbjct 3747 AGAACTTGGAGTCGTGGGAGATGATGATGGAGGTGCAAG---GAGAGTTGAC---GAGGT 3800
Query 225507 GCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565
| || | |||||| || ||||| |||||||||||||||| || || ||||| || ||
Sbjct 3801 AC-TGCTCGAGCCAAGCAACGTTCTTGACGTCCATGTGGTTGGTGGGCTCGTCGAGCAGA 3859
Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625
|| || || | || || || ||| || | |||| ||||||||| ||||| || ||
Sbjct 3860 AGAATATCGGGCTCCTCGAAGACGGCACGGGCAAGAGCCAGCTTCATCTTCCAACCACCA 3919
Query 225626 GACAGGGAGCCGATTGAAACAGAGTGCTTAGCTT-CGT-CAAAGCCGTACTCCAGGAGCG 225683
|| || ||| ||| | | | | || ||| || | || ||| ||||| ||||
Sbjct 3920 GAGAGCGAGGTGATGGGAGCCTCGAACT--GCTCGCGAACGAAACCGAACTCCTCGAGCT 3977
Query 225684 T---CTGGATAA-----TGCG-CTCGG-GAGAGCTGCGAGCGGCAACGTTGGGGTCGGAC 225733
| ||||| | || | || || || | | || ||| ||| || || |
Sbjct 3978 TGTTCTGGACATCCTCCTGGGTCTTGGTGACACCAGC-AGCCTCAAGCTTCTTCATGGTC 4036
Query 225734 GAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTAC 225793
|| ||| | ||||| || | | | | | ||| | |||||| || |||||
Sbjct 4037 CAGCC--AATGA----CGGTCTGCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACGTAG 4090
Query 225794 ACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGG 225853
|| ||| || || || | |||||| ||||| ||||| | || || |||||
Sbjct 4091 ACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAGCTGCTCGTTGTTGATGGCACGC 4150
Query 225854 AGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTG 225913
| ||||| |||| || | |||||||| || | || ||||| | | || |||||
Sbjct 4151 ATGAGGGTGGTCTTACCGGAACCGTTGGGGCCCAGAAGACCGTAGCGGTGGCCACGCTTC 4210
Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973
| ||| | || ||| || || |||||| |||| ||||| |||||||| |||
Sbjct 4211 AGACGCAGGTGAGTCTGGTTGAGCAGAATCTTGGCACCGTAGGCCAGGGAGAAAGTGCAG 4270
Query 225974 TCGCACAGGTCCTCACCCTCCTC 225996
| |||||| ||||||||||||||
Sbjct 4271 TTGCACAGATCCTCACCCTCCTC 4293
>seq1386
Length=66401
Score = 98.7 bits (108), Expect = 2e-15
Identities = 282/431 (65%), Gaps = 2/431 (0%)
Strand=Plus/Plus
Query 59091 AGTAGAGCATGCCGGACAGGAAGCAGGCCTTTTGGCGGAAGCTCAGATTGGACTTCCAGA 59150
|||| | |||||| |||| | || | || ||| ||| || ||||| ||||||
Sbjct 35123 AGTACATCATGCCCGACAAATAACATACTTTCTGGATGAAAGAGAGCTTGGATCTCCAGA 35182
Query 59151 AGTGGGGGTTGGTGCACAGAGTCGTGGAACCCAGCGCCCAACGGTATTGCTGGCTGAAGA 59210
| | || || ||| |||||| |||||||||| ||| || ||||||| ||| |
Sbjct 35183 ACTCTGGATTTGTGAGCAGAGTTGTGGAACCCATGCACCAGCGCATTTGCTGGGAGAAAA 35242
Query 59211 ACGACTTGAGCTCGTAGGGGCAAACTCCCTTGGCAAGGTTCAGGGGAATGTACTTGAGCT 59270
||| | | | || ||||| || || ||||| ||| |||| ||||| || |
Sbjct 35243 ACGCGCGGGGATTGTCAGGGCAGACGCCGGCAGCAAGACACAGAGGAACGTACTCGACCG 35302
Query 59271 TCCAGCCGTCGTCAACTACTGCAAAGCCCGTGTGGACGTCCTCGCTGAAGCCAATCTCAG 59330
|||| || |||||| | |||| || |||||||| || ||| | || ||||| |
Sbjct 35303 TCCACCCACGGTCAACAGCCCCAAAACCAGTGTGGACATCTTCGGAATATCCGATCTCTG 35362
Query 59331 CAGTGCCGCCGAAAGGTACAAGCGCCTCTCGGCGGTAGACTGCGCATGTCCCGACGCACA 59390
|||||||||| | | || || || || ||||| || || | || ||||| |
Sbjct 35363 CAGTGCCGCCCACCTCAGCCAGAGCTTCACGACGGTACACGGCATTGCTGCCCACGCAGA 35422
Query 59391 CGGCGCCGCCAAAGGTGTCGCGAGAAACCTGGATGAAACGGTAGAACAGTTCCTGGACGG 59450
| | | || || || ||| ||||| | | |||||||| || || || ||
Sbjct 35423 TCGAGGCCCCCCAGCGGTTGCGGTTGACCTGAACAACGCGGTAGAAAAGCTCTTGACAGG 35482
Query 59451 ATCCAGCAGCGCGCTCAACCCAAGTCTGGTCGGGGCGAACCTC-GAAGAACTGGGGGGTC 59509
|| ||| | |||| ||||| || || || ||| || || ||||||||| || | |
Sbjct 35483 CGCCGGCACCCTGCTCCACCCATGTGTGCTC-AGGCAAAGTTCGGAAGAACTGAGGAGAC 35541
Query 59510 TGCACAATCGC 59520
|| || |||||
Sbjct 35542 TGGACGATCGC 35552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921560420893600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |