Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq4076 264 2e-65
seq1094 210 4e-49
seq818 86.0 1e-11
>seq4076
Length=19007
Score = 264 bits (292), Expect = 2e-65
Identities = 598/901 (66%), Gaps = 75/901 (8%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || || |||||| || ||||||||||| || |||||||
Sbjct 10754 ATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCTGAGGAGATTGATCTTTCCAAGGAT 10695
Query 42369 ACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | | || || |||| || ||| || || | ||
Sbjct 10694 CTTCACGACTGGAACAAGCGCCTCAACGATGACGAGCGCTTCTTCATCTCCCACGTCCTC 10635
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|| ||||||||||| ||||||||||| || || |||||||| | | | ||||
Sbjct 10634 GCTTTCTTCGCCGCGTCTGACGGCATCGTGAACGAGAACCTCGTCGAACGCTTCAGCTCC 10575
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
||||| ||| | ||||| |||||||||||||| |||||||| || |||||| |
Sbjct 10574 GAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATC 10515
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
|| |||||| ||| | || || |||| |||||| || ||| |||| |||
Sbjct 10514 CATTCTGAGACCTACTCGCTTCTCATCGACACATACATCAGCGAGCCCAGGCAGCGCAAC 10455
Query 42606 GGGCTGTTCAAGGCCATGGAGA--------------------CGATG------------- 42632
|| ||||| ||||| || | |||||
Sbjct 10454 TATCTTTTCAACGCCATTGATAACAGTAAGCCCAATCCGCCTCGATGATGCAAAGCTTGG 10395
Query 42633 --------------------CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGA 42672
|| ||||||||||||||||| |||||||| || ||||
Sbjct 10394 ATCGCTAAAGTACTATAGTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGA 10335
Query 42673 TCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731
|| | | | || | | || |||| | | || | || || | |||||||||||
Sbjct 10334 TCT-GCGACAAGAACTCGACCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGT 10276
Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCC 42790
||||||||| ||| | ||||||||||| |||||||||||| || || || |||||
Sbjct 10275 ATCTTCTTCAGCGGCTCTTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTC-ATGCC 10217
Query 42791 CGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGC 42850
|| | || ||||| || || |||||| | || ||||| |||||| ||||| ||
Sbjct 10216 TGGTTTGACTTTCTCCAATGAGCTCATCTCTCGCGATGAGGGCATGCATACCGACTTCGC 10157
Query 42851 CTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG----GG 42906
|||||| ||||||||| ||| ||| | |||||| || || || | |
Sbjct 10156 CTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCC----AGCCCCGAATCTGTTGAGA 10104
Query 42907 CCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT 42966
|||||||| ||||| || |||||||||||||||||||||||| | | || |||||
Sbjct 10103 AGATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCG 10044
Query 42967 CCCTGGTCGGCATGAACCACGAC-CTCATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025
| || | ||||||||| |||| ||||||||| |||||||| ||| ||| || ||||
Sbjct 10043 CTCTTCTTGGCATGAACG-CGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGC 9985
Query 43026 CTCCTG-TGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084
|| ||| || | | |||| || ||||||| || | |||||||||||| ||
Sbjct 9984 CTGCTGGTGGC-GCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCAT 9926
Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||||| | | |||||||| ||||| |||||||||||||| | ||||||||
Sbjct 9925 GGAGAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCA 9866
Query 43145 G 43145
|
Sbjct 9865 G 9865
>seq1094
Length=88458
Score = 210 bits (232), Expect = 4e-49
Identities = 486/727 (67%), Gaps = 4/727 (1%)
Strand=Plus/Minus
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
|||||| || || || || || | |||||||| ||| || ||| ||| |||||
Sbjct 25618 GTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGACGATTTCGCAGCACAGGTTGGA 25559
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| |||||||| |||| || || ||| |||| ||||||| ||||||||| |
Sbjct 25558 GCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAA 25499
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAG 244871
||||||||| ||||| |||| |||||| |||||| ||| || |||||| | | ||
Sbjct 25498 CATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGATCGC-GTACCAGAGCTTCTGAG 25440
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
| ||| ||| |||| | ||||| ||| || | ||| ||||||||||| |
Sbjct 25439 CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATT 25380
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
| || |||| ||| | || || |||||| ||||||||||| |||| ||
Sbjct 25379 CCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGC 25320
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || || | || ||||||||| ||||| |||||||| || | ||| ||||| |
Sbjct 25319 CGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCAC 25260
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
| | ||| || || |||||| | || || | |||| ||||| ||
Sbjct 25259 GAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAG 25200
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
| ||||| ||||| | ||||| |||| || ||||| |||||||| || |||||||| |
Sbjct 25199 CATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAA 25140
Query 245172 CCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230
| | | || | |||| | | || || |||| | | |||||| | ||||
Sbjct 25139 CGTAGCGGGC-AGTGTTGTTGTACACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCG 25081
Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290
|| || || |||||| ||| || | | || | | | | || || | ||
Sbjct 25080 TTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATGCGGTGAACGTTCAGACCGATACCA 25021
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|||||| ||||||||| | ||| ||| |||| | |||||| || ||||| |||||
Sbjct 25020 CCGGCGGTCTTGGAGATCATGGCACAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTA 24961
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410
||| |||||||| || || ||||| || | || ||| |||||||| | | | |||
Sbjct 24960 TCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTG 24901
Query 245411 AACAGAG 245417
|||||||
Sbjct 24900 AACAGAG 24894
>seq818
Length=19501
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002
||| | ||||| ||| | || || |||||||| |||||||||||| |||| || | |
Sbjct 4648 ATGCGCTTCCCAGACCGCACGACGCCGATCGGGCAGATGATCAACGCGTATCTCACCGGC 4707
Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062
|||||| | || || |||||| | ||||| || ||||| || ||||| ||||||||
Sbjct 4708 GCGAGCGAGCAAGAGGACCACGTCATTCACCTGCTCTTCTCTGCAAACCGCTGGGAAGCT 4767
Query 243063 GC 243064
||
Sbjct 4768 GC 4769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944275693188800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |