Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4076 150 2e-31
>seq4076
Length=19007
Score = 150 bits (166), Expect = 2e-31
Identities = 172/226 (76%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | ||||| |||||||| | |||| ||| || || |||| || || |||
Sbjct 10092 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCGCTCTTCTTGGC 10033
Query 52674 ATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCA 52732
||||||||| | || ||||||| ||||||||||||| || || || || ||| |||||
Sbjct 10032 ATGAACGCG-ACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGC 9974
Query 52733 GCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791
||| ||||| | | ||||||| |||| | ||| || || || || ||| | ||||| |
Sbjct 9973 GCT-GGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCT 9915
Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||| | |||||||| ||||| ||||||||||| || || || ||
Sbjct 9914 CGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 9869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496229026353600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |