Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4076 150 2e-31 >seq4076 Length=19007 Score = 150 bits (166), Expect = 2e-31 Identities = 172/226 (76%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | ||||| |||||||| | |||| ||| || || |||| || || ||| Sbjct 10092 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCGCTCTTCTTGGC 10033 Query 52674 ATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCA 52732 ||||||||| | || ||||||| ||||||||||||| || || || || ||| ||||| Sbjct 10032 ATGAACGCG-ACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGC 9974 Query 52733 GCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTT 52791 ||| ||||| | | ||||||| |||| | ||| || || || || ||| | ||||| | Sbjct 9973 GCT-GGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCT 9915 Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||| | |||||||| ||||| ||||||||||| || || || || Sbjct 9914 CGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 9869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496229026353600