Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq4076 107 2e-18
>seq4076
Length=19007
Score = 107 bits (118), Expect = 2e-18
Identities = 162/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412
|||| || |||| || |||| |||||| || | || ||||| |||| || | | |
Sbjct 10094 CCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTCCCCGTCGCTCTTCTTG 10035
Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472
| ||||||||| | ||| | |||||||||| || || || ||||||||||| ||
Sbjct 10034 GCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGG 9975
Query 47473 AGCTAAAGTATCCCAAGATTTACCACACCGAGA---ATCCATTCGAGTTTATGAACAACA 47529
||| | ||||| ||| ||| | || | || ||||| || ||| | ||||
Sbjct 9974 CGCTGGGCAA---CAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACA 9918
Query 47530 TTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
| |||||| | |||||||| ||||| |||||||||||||| || || ||
Sbjct 9917 TCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 9869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475468822571200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |