Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4076 259 5e-64
seq1227 95.1 1e-14
>seq4076
Length=19007
Score = 259 bits (286), Expect = 5e-64
Identities = 581/877 (66%), Gaps = 68/877 (8%)
Strand=Plus/Plus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
||||| || || || || || || | | || ||| | ||| || || |||||||||
Sbjct 9884 TTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTG 9943
Query 132685 GCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCG 132744
| | |||||||| ||| || | ||| | || ||||| | ||| || |||||||||
Sbjct 9944 GTCGAGTTGTAGTACTTCTTGTTGCCCAGCGCCACCAGCAGGCGGTCAGCAACGAACTCG 10003
Query 132745 ATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGT 132803
||||| || ||||| | |||| | | | || || ||| || || || || || ||
Sbjct 10004 ATGTACTGGCACATGAGAGTCGCGTTCATG-CCAAGAAGAGCGACGGGGAGAGCGTCCGT 10062
Query 132804 GAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT 132863
||| || | |||||| |||| || ||||||| ||| | | ||| | | |||
Sbjct 10063 GAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATCTTCTCAACAGATTCGGGGCT 10122
Query 132864 CGGCCGTTGCACCAAATG--CTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCG 132921
||| || || ||| | ||||| || ||| || |||||| ||||| ||||||
Sbjct 10123 GGGC--TTCGACTTGATGTGCGAGAACAGCAGGCAGGCGAAGTCGGTATGCATGCCCTCA 10180
Query 132922 TCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGC 132981
|| | || ||||| || ||| ||||||||| || ||||||||||| || || ||||||
Sbjct 10181 TCGCGAGAGATGAGCTCATTGGAGAAAGTCAAACCAGGCATGAGGCCACGCTTCTTGAGC 10240
Query 132982 CAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACC 133041
|| || |||| ||||||| ||| ||||||| |||||||||||||||||||| |
Sbjct 10241 CAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAGATACCCTCGACGGCCGCGAAAGCAATG 10300
Query 133042 AGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTT 133101
|||||| |||| || | | ||| | |||||| || || ||||| ||||||||
Sbjct 10301 AGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCCAACGAAGGGCCCAGTCGGCCTTC 10360
Query 133102 TCTTTGACGCACGG---------------------------------CATCG-------- 133120
| |||| |||||| |||||
Sbjct 10361 TTCTTGATGCACGGGACTATAGTACTTTAGCGATCCAAGCTTTGCATCATCGAGGCGGAT 10420
Query 133121 ------------TTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--AC 133166
| || |||||||| | ||| |||| | || || || ||| |
Sbjct 10421 TGGGCTTACTGTTATCAATGGCGTTGA--AAAGATAGTTGCGCTGCCTGGGCTCGCTGAT 10478
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| ||||||||||| ||| || | || || || | ||||||||| || || ||
Sbjct 10479 GTATGTGTCGATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCATAATCTGGAA 10538
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
||||| ||||| || |||||| | ||| || || |||| ||| || ||||| || |
Sbjct 10539 ACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTC-GGAGCTGAAGCGTTCGACGAGGT 10597
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| ||||| ||||||||||| |||||||| || || || ||||| |||||| ||
Sbjct 10598 TCTCGTTCACGATGCCGTCAGACGCGGCGAAGAAAGCGAGGACGTGGGAGATGAAGAAGC 10657
Query 133346 GCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
|||||| ||||| | |||| | ||||||| | |||||||| || || | |||||
Sbjct 10658 GCTCGTCATCGTTGAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAAAGATCAATCTCCT 10717
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| || || |||||||| || ||||||||
Sbjct 10718 CAGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 10754
>seq1227
Length=46781
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| |||||| | ||||| ||||| || || | ||||||||| ||||| ||
Sbjct 32685 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCGGGCAAGCAGCTCGAG 32744
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | ||||| || ||||||||||||||| ||||| |||| || || | |||||
Sbjct 32745 GATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTTGTGCTC 32804
Query 38457 CG 38458
||
Sbjct 32805 CG 32806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500139163379200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |