Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1094 147 3e-30 seq2014 113 5e-20 >seq1094 Length=88458 Score = 147 bits (162), Expect = 3e-30 Identities = 486/750 (65%), Gaps = 13/750 (2%) Strand=Plus/Minus Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 |||| || || | |||||| | |||||||||| || || ||||||| || | Sbjct 25640 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 25581 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 ||||| |||| |||||| || |||| || | ||||||||| || ||| Sbjct 25580 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 25521 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 |||||| ||||| || | |||| | ||| |||| ||||| ||| | || ||| | Sbjct 25520 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 25461 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTAC 110517 | || | ||| | | || | | | ||||||| || | | |||| |||| ||| ||| Sbjct 25460 TCGCGTACCAGAGCTTCTGAG-CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATAC 25402 Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577 | ||| | | |||| ||||||| || || || || | |||||| || || Sbjct 25401 TGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTA 25342 Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637 || || | ||||| ||| | || || |||||| | ||||||||| || || |||||| Sbjct 25341 GGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATC 25282 Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697 || | || ||||||||||||| ||| |||| || | || ||||| || || Sbjct 25281 CAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGG 25222 Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------TGGAT 110751 || | |||| | || ||| | ||||| || ||||| |||| |||| || Sbjct 25221 TCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGG 25162 Query 110752 CCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATA 110811 | ||| || || |||||| ||| ||||| || ||| ||| | || | ||||||| Sbjct 25161 CGCTTGTTACCAC---CCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATA 25105 Query 110812 GGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATG 110871 || || | || | | || || ||||| ||| | | ||||||| ||| Sbjct 25104 GGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATG 25045 Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAG 110930 ||| | | || ||| |||||||| || ||| || ||||| ||| | || Sbjct 25044 CGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCT-TCAG 24986 Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990 || | || ||||| ||||| ||| |||| || | || || |||||||||| || Sbjct 24985 GGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAA 24926 Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020 |||||| || || || |||||||| || Sbjct 24925 CTGAGGCTTGGGAGTACCAGCATTGAACAG 24896 >seq2014 Length=35049 Score = 113 bits (124), Expect = 5e-20 Identities = 332/498 (67%), Gaps = 23/498 (5%) Strand=Plus/Minus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 |||||||| || || || | ||||| | |||||| | ||| | ||| || | || Sbjct 32689 TCGAAACGGCCAGGACGCATAAGAGCCTTATCAAGCACATCAGGTCTGTTGGTGCCTGCC 32630 Query 11566 ATGACTACAATGCCAGTCTCAT--TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGA 11623 | || |||| || || | ||| |||||||||||| || ||||| | ||||| | Sbjct 32629 AGAACGACAA--CCTGTTCCGACGTGTTGAAACCGTCCATCTCCGTGAGGATTTGGTTCA 32572 Query 11624 TCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTC--TTACCGA 11680 || ||| | |||||||||| | || | |||| | ||| || |||| Sbjct 32571 GGGTACTTTCTCTCTCATCGTTGCCACCGCCAAAGCTCTGCTTCGCTCTTGATTTGCCGA 32512 Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC---CTGTT-CG 11736 ||| || || ||||||||||| | || || || ||| || | | | ||||| || Sbjct 32511 TAGCATCGATTTCATCGATGAAAATAATGCAGGG--GGT--GCTCTTCCGCGCTGTTGCG 32456 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGG 11794 ||||| ||||| || | | || ||||| || |||||||| ||||| | | | | Sbjct 32455 AAAAGGTCACGGACTCTAGAGGGGCCGACACCCACAAACATCTCCACGAACTCGGAACCG 32396 Query 11795 CAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 | ||| ||||| ||| || || | ||| ||||| || |||| |||||| | |||| Sbjct 32395 C-TAACGCTGAA-GAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACGTCT 32338 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| ||||| || | ||| | ||||| ||| ||||| ||||| |||||||| |||| Sbjct 32337 TACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACCGAGCTTCT 32278 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972 | ||| |||| | ||||||||| || | |||| | ||| | |||||| Sbjct 32277 GA--TAGACACCAGGTTCCTTGAGGAAACTGACGAACTCCATGATTTCTTGCTTGGCCTC 32220 Query 11973 GTCGATACCCTCAACATC 11990 ||| || || |||| || Sbjct 32219 GTCCATTCCAGCAACGTC 32202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588936391364000