Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 147 3e-30
seq2014 113 5e-20
>seq1094
Length=88458
Score = 147 bits (162), Expect = 3e-30
Identities = 486/750 (65%), Gaps = 13/750 (2%)
Strand=Plus/Minus
Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338
|||| || || | |||||| | |||||||||| || || ||||||| || |
Sbjct 25640 TGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGCGGTGTACTCGA 25581
Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398
||||| |||| |||||| || |||| || | ||||||||| || |||
Sbjct 25580 CGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTGGTTGCTCTTGC 25521
Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458
|||||| ||||| || | |||| | ||| |||| ||||| ||| | || ||| |
Sbjct 25520 GGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTGGGCCTCGAGGA 25461
Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTAC 110517
| || | ||| | | || | | | ||||||| || | | |||| |||| ||| |||
Sbjct 25460 TCGCGTACCAGAGCTTCTGAG-CACGGACAGTCTCGCGACCACGACCCTCCTTCTCATAC 25402
Query 110518 TTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCG 110577
| ||| | | |||| ||||||| || || || || | |||||| || ||
Sbjct 25401 TGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAGGGCACTCGTTA 25342
Query 110578 GGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATC 110637
|| || | ||||| ||| | || || |||||| | ||||||||| || || ||||||
Sbjct 25341 GGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGAGATCGGGAATC 25282
Query 110638 CACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGC 110697
|| | || ||||||||||||| ||| |||| || | || ||||| || ||
Sbjct 25281 CAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGTTCTTACGGAGG 25222
Query 110698 TCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------TGGAT 110751
|| | |||| | || ||| | ||||| || ||||| |||| |||| ||
Sbjct 25221 TCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGAAAGCACCGGGG 25162
Query 110752 CCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATA 110811
| ||| || || |||||| ||| ||||| || ||| ||| | || | |||||||
Sbjct 25161 CGCTTGTTACCAC---CCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACACGGAGCATA 25105
Query 110812 GGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATG 110871
|| || | || | | || || ||||| ||| | | ||||||| |||
Sbjct 25104 GGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTGGCACGGATG 25045
Query 110872 TCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAG 110930
||| | | || ||| |||||||| || ||| || ||||| ||| | ||
Sbjct 25044 CGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAGGTCT-TCAG 24986
Query 110931 TGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACAT 110990
|| | || ||||| ||||| ||| |||| || | || || |||||||||| ||
Sbjct 24985 GGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAAGAAGCCAA 24926
Query 110991 CTGAGGACGAGGCGTTCCCGCATTGAAGAG 111020
|||||| || || || |||||||| ||
Sbjct 24925 CTGAGGCTTGGGAGTACCAGCATTGAACAG 24896
>seq2014
Length=35049
Score = 113 bits (124), Expect = 5e-20
Identities = 332/498 (67%), Gaps = 23/498 (5%)
Strand=Plus/Minus
Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565
|||||||| || || || | ||||| | |||||| | ||| | ||| || | ||
Sbjct 32689 TCGAAACGGCCAGGACGCATAAGAGCCTTATCAAGCACATCAGGTCTGTTGGTGCCTGCC 32630
Query 11566 ATGACTACAATGCCAGTCTCAT--TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGA 11623
| || |||| || || | ||| |||||||||||| || ||||| | ||||| |
Sbjct 32629 AGAACGACAA--CCTGTTCCGACGTGTTGAAACCGTCCATCTCCGTGAGGATTTGGTTCA 32572
Query 11624 TCGTCTGTTCACGCTCATCGTTGG-AGGGCATACCACCTGCCGAACGCTTC--TTACCGA 11680
|| ||| | |||||||||| | || | |||| | ||| || ||||
Sbjct 32571 GGGTACTTTCTCTCTCATCGTTGCCACCGCCAAAGCTCTGCTTCGCTCTTGATTTGCCGA 32512
Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC---CTGTT-CG 11736
||| || || ||||||||||| | || || || ||| || | | | ||||| ||
Sbjct 32511 TAGCATCGATTTCATCGATGAAAATAATGCAGGG--GGT--GCTCTTCCGCGCTGTTGCG 32456
Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGG 11794
||||| ||||| || | | || ||||| || |||||||| ||||| | | | |
Sbjct 32455 AAAAGGTCACGGACTCTAGAGGGGCCGACACCCACAAACATCTCCACGAACTCGGAACCG 32396
Query 11795 CAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854
| ||| ||||| ||| || || | ||| ||||| || |||| |||||| | ||||
Sbjct 32395 C-TAACGCTGAA-GAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACGTCT 32338
Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912
|||| ||||| || | ||| | ||||| ||| ||||| ||||| |||||||| ||||
Sbjct 32337 TACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACCGAGCTTCT 32278
Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972
| ||| |||| | ||||||||| || | |||| | ||| | ||||||
Sbjct 32277 GA--TAGACACCAGGTTCCTTGAGGAAACTGACGAACTCCATGATTTCTTGCTTGGCCTC 32220
Query 11973 GTCGATACCCTCAACATC 11990
||| || || |||| ||
Sbjct 32219 GTCCATTCCAGCAACGTC 32202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588936391364000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |