Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4398 95.1 1e-14 >seq4398 Length=160186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 || || | ||| || || || ||||| || ||||| || || ||||| || || || || Sbjct 59747 AAAGGAGCGAGGTGCTTGGCAACACCGATGGGACCGACACCGGGACCACCGCCACCGTGG 59688 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||||||||| ||||| || | || ||||| || ||||| || ||| |||| || Sbjct 59687 GGAATACAGAAGGTCTTGTGGAGGTTCAGATGGCAGACATCAGCGCCAATCTCACCGGGC 59628 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||||| | ||| || || | || ||||| || | || ||||| ||||||| Sbjct 59627 GAGCAAAGACCGATCTGGGCGTTCATGTTGGCACCGTCCATGTAGACCTGCCCACCATGC 59568 Query 138342 TCATGAACGATCTTACA 138358 || |||||||| || || Sbjct 59567 TCGTGAACGATTTTGCA 59551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578959462357600