Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1288 414 1e-110
seq656 120 4e-22
seq3143 114 2e-20
seq3277 89.7 7e-13
>seq1288
Length=17335
Score = 414 bits (458), Expect = 1e-110
Identities = 849/1258 (67%), Gaps = 17/1258 (1%)
Strand=Plus/Plus
Query 195630 CTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCA 195689
|||| || || ||||| || ||||| | | ||||||| ||||||||| || |||| |
Sbjct 139 CTCCTGAGGAGATTTCCTCCATGGTCCTCACCAAGATGAGGGAGACTGCCGAGTCTTACC 198
Query 195690 TGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAAC 195749
| ||| || || || | || || || ||||| || || ||||||| || || || |
Sbjct 199 TCGGTGGCACCGTCAACAACGCTGTCGTCACTGTCCCCGCCTACTTCAACGACTCTCAGC 258
Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809
| ||||| || ||||| || | | ||||| || || ||| || | || ||||| |
Sbjct 259 GTCAGGCCACCAAGGATGCCGGTCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACG 318
Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGAC---GAAGATAAAA 195866
| || || || ||||| || || || ||||| |||||||| || | | || |
Sbjct 319 AGCCCACCGCTGCTGCTATCGCCTACGGTCTTGACAAGAA---GGCCACTGGCGAGCGCA 375
Query 195867 ATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAG 195926
| || ||||||| ||||| ||||||||||| || |||||||| || || | ||| || |
Sbjct 376 ACGTCCTGATCTTCGATCTTGGTGGTGGTACTTTCGATGTCTCGCTCCTGACTATCGAGG 435
Query 195927 GTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCG 195986
||||| ||||| || ||| | || || ||||| ||||| || |||||||| || || |
Sbjct 436 AGGGTATCTTCGAGGTCAAGTCCACCGCCGGTGACACTCACCTTGGTGGTGAGGACTTTG 495
Query 195987 ATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045
| || ||| || || || ||| | || ||| ||||| | || || || |
Sbjct 496 ACAACCGCCTTGTCAACCACTTCGTC-AACGAATTCAAGAGAAAGCACAAAAAGGACTTG 554
Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105
|| || || | || || || || || | ||||| || || |||||||| || ||
Sbjct 555 ACTACCAACGCTCGCGCCCTCCGCCGTCTCCGCACTGCTTGCGAGCGTGCCAAGCGCACC 614
Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165
|| || | || || || | ||||| || || |||| || || |||||||||
Sbjct 615 CTGTCCAGCTCTGCGCAGACCTCCATCGAGATCGACTCCCTGTTCGAGGGTATTGACTTC 674
Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGT 196225
|| || | || |||||||| ||||| || ||| | | || | || |
Sbjct 675 TACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACC 734
Query 196226 ATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAA 196285
||||| ||||| || | || || ||||| || ||||| || ||||| || | ||
Sbjct 735 ATGGAGCCTGTCGAGCGTGTCCTCCGTGATGCCAAGATCGACAAGTCCTCCGTCCACGAG 794
Query 196286 ATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTC 196345
|| ||||| || || || || |||||||| || ||||| || ||||| |||| ||||
Sbjct 795 ATCGTCCTCGTTGGTGGCTCCACCCGTATCCCCAAGATCCAGAAGATGGTTTCCGACTTC 854
Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCG 196405
||||| || || ||||| | |||||||| ||||| || ||||| || |||||
Sbjct 855 TTCAACGGCAAGGAGCCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCT 914
Query 196406 GCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAAT------AATAACGTCCAAGATCTT 196459
||||| ||||| ||||| || || || ||||| | || | | | || ||
Sbjct 915 GCCGTCCAGGCCGCTATCCTGTCCGG---TGACACTTCCTCCAAGTCCACCAACGAGATT 971
Query 196460 CTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACT 196519
||||| || ||||| || || | ||||| ||| | || || || |||||||| ||||||
Sbjct 972 CTGCTTCTCGATGTCGCTCCTCTCTCCCTCGGTATCGAGACCGCTGGTGGTGTCATGACT 1031
Query 196520 AAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTAT 196579
| || | | ||||| || ||||| || |||||| | ||||| || || |
Sbjct 1032 CCTCTGATCAAGCGCAACACCACCATTCCCACCAAGAAGTCCGAGGTCTTCTCCACCTTC 1091
Query 196580 TCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAG 196639
||| || || || ||||| | ||| || || | || || || || | || | |||
Sbjct 1092 AGCGACAACCAGCCCGGTGTCCTTATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAG 1151
Query 196640 GATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTT 196699
|| ||| | || || || | ||||| | || || ||||| | || ||| | ||||||
Sbjct 1152 GACAACAACCTGCTCGGCAAGTTCGAGCTCACCGGCATTCCCCCGGCTCCCCGTGGTGTT 1211
Query 196700 CCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAG 196759
|| ||||| | || |||||| | || || || || || | |||||| | |||
Sbjct 1212 CCCCAGATCGAGGTCACCTTCGACGTTGATGCCAACGGTATCATGAACGTCTCCGCTCTC 1271
Query 196760 GACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCT 196819
|| |||| ||||||| | | ||||| || |||||||| |||||||| || || ||
Sbjct 1272 GAGAAGGGCACTGGCAAGACCAACAAGATCGTCATTACCAACGACAAGGGCCGTCTGTCC 1331
Query 196820 AAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877
|||||||| || || |||||| || || || || ||||||| || || || ||||
Sbjct 1332 AAGGAGGAGATCGAGCGTATGCTTGCTGAGGCCGAGAAGTACAAGGCCGAGGATGAGG 1389
>seq656
Length=45863
Score = 120 bits (132), Expect = 4e-22
Identities = 201/284 (71%), Gaps = 9/284 (3%)
Strand=Plus/Minus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| ||||| ||||| || || ||||||| || | || || || || ||||||||
Sbjct 1009 GCCGTTGTCACTGTTCCCGCCTACTTCAACGACGCTCAGAGAGCCGCTACCAAGGACGCC 950
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAAT 195828
| | | ||||| ||||| || |||| | | || |||| || || || ||||| || |
Sbjct 949 GGTACCATTGCCGGTCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACCGCGGCCGCTCT 891
Query 195829 TGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAA----ATGT-ATTGATCTTTGAT 195883
|| || |||||||||||||| | ||| |||| || | | |||| ||| |||
Sbjct 890 GGCCTACGGTCTGGACAAGAAGGATGAC-AAGACTGAACGCCAGATCATTG-TCTACGAT 833
Query 195884 CTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTA 195943
|| ||||||||||| || ||||| || |||| | | | || | || | ||||| ||
Sbjct 832 CTTGGTGGTGGTACTTTCGATGTTTCCATTCTTACTGTCGACGAGGGCGTTTTCGAGGTC 773
Query 195944 AAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||||| |||||||| ||||| || |||||||| || || ||
Sbjct 772 CAGGCTACCGCTGGTGACACTCACCTTGGTGGTGAGGACTTTGA 729
>seq3143
Length=89464
Score = 114 bits (126), Expect = 2e-20
Identities = 189/272 (69%), Gaps = 3/272 (1%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || || ||||||| || || || ||||| || |||||||| | ||| |||
Sbjct 57743 ACTGTCCCGGCCTACTTCAACGACAACCAGCGTCAGGCCACCAAGGACGCCGGTGCCATT 57684
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| || | || || || || || || || || || ||||| || |||
Sbjct 57683 GCCGGGCTCAACGTCCTCCGTATCATTAACGAGCCTACTGCCGCCGCCATTGCCTACGGT 57624
Query 195839 CTGGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|| | | |||| ||| || | || || |||||| || || |||||||||
Sbjct 57623 CTCGGCTCCGGCAAGTCCGAGAAGGAGAGGAACGTCCTGATCTACGACCTTGGTGGTGGT 57564
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| ||||| | || | || ||| | ||| || ||||| || |||
Sbjct 57563 ACTTTCGATGTCTCCCTTCTGCACATCCAGGGCGGTGTCTTCACTGTCAAGGCCACCGCT 57504
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| ||||| || |||||| | || |||||
Sbjct 57503 GGTGACACTCACCTTGGTGGTCAGGACTTCGA 57472
>seq3277
Length=56197
Score = 89.7 bits (98), Expect = 7e-13
Identities = 218/328 (66%), Gaps = 8/328 (2%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || |||| | | || || | ||| || | || || || |||
Sbjct 53538 AAGATGAAGGAGACCGCCGAGTCTTACCTTGGCAAGAATGTCAAGAACGCCGTCGTCACT 53597
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || || || ||||| || ||||| || | | || |
Sbjct 53598 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCAGATCTCT 53657
Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840
|| || || ||| || | || |||| || || || || || || | || || |||||
Sbjct 53658 GGCCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACGGCTGCCGCTCTCGCCTACGGTCT 53716
Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
|| ||| | ||||| | | || ||| |||||| ||||||||||| ||
Sbjct 53717 TGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTATGATCTTGGTGGTGGTACTTT 53770
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
||| | || |||| | || | || | ||||| || ||| | || |||||
Sbjct 53771 CGATATTTCCATTCTTGAGATCCAGAACGGCGTCTTCGAGGTCAAGTCCACCAACGGTGA 53830
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988
||||| || ||||| || || ||||||
Sbjct 53831 CACTCACCTCGGTGGCGAGGACTTCGAT 53858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657818158753600
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