Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2903 138 3e-27
seq1545 96.9 1e-14
>seq2903
Length=84294
Score = 138 bits (152), Expect = 3e-27
Identities = 198/279 (71%), Gaps = 0/279 (0%)
Strand=Plus/Minus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||||| ||| || | | ||||| || |||||| ||||| || ||||| | || ||
Sbjct 5764 CATAACGTCCTCAAGAGCCTTGACTAGACGACGTTGAATGTATCCAGTCTCGGCAGTCTT 5705
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
||||| ||||| || ||||| |||||||| |||| || |||||||| | ||| ||
Sbjct 5704 GACAGCAGTATCGATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAACTCCGAGGG 5645
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
||| || | | ||||| ||| ||||| || | ||| ||||||| | ||||
Sbjct 5644 AGTTAGACCACGCAGGTAGGAGTTCTGGACGAATCCTCTAGCCGCGGGCGAGTAGTCGTC 5585
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
||| |||||||| |||| |||| || || | ||| |||| |||||||| || |||||
Sbjct 5584 CTTTGTAAAGTGCGGCAAAGTCCGGTACTTGAATCCGAATGGAATACGCTTACCCTCAAC 5525
Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
| ||| || || | || | ||||||||||||| ||
Sbjct 5524 GGACTGTTGACCGACAAGCGCAGTCATCTGCGAAATGTT 5486
>seq1545
Length=114843
Score = 96.9 bits (106), Expect = 1e-14
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| || || ||||||||| ||||||||| ||||| ||||| |||| ||||| | ||
Sbjct 51776 TGAGCAATCGTCATACGAGAGGGAATAGCGTGGGGGTTGATAATGAGATCGGGAGTAAGA 51717
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957
|| ||| ||||||||||||||||| | | || | | ||||| || ||||||||
Sbjct 51716 CCCTCACGAGTGAAGGGCATATCCTCAT-GGCGGTAGGTAATACCAATGGTACCCTTTTG 51658
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||| |||||||| || ||
Sbjct 51657 ACCGTGACGAGAAGCAAACTTATCTCCGAT 51628
Score = 96.9 bits (106), Expect = 1e-14
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490
||||| | ||| ||||| || | || | || || |||| |||| | |||||||
Sbjct 52184 TGGACACGGTACGCATCCGAGACTTCGAACAGACGCTCCTTCAAGAAGGCACTTGCACCG 52125
Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550
||||| |||||||||||||| ||||| || ||||| || || |||||||| | || | |
Sbjct 52124 TGTGAGATCATACAATCACGTTCCATCTCTCCGAACCGCAGGCCACCATCTCTGGCACGA 52065
Query 251551 CCCTCGGCAGGCTGACGAGTGAG 251573
|| ||| ||||||| || |||||
Sbjct 52064 CCTTCGACAGGCTGGCGGGTGAG 52042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471716145773060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |