Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3143 109 6e-19 >seq3143 Length=89464 Score = 109 bits (120), Expect = 6e-19 Identities = 190/271 (70%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183 |||||||| || ||||| ||||| ||||||||| || ||||| || | | Sbjct 39282 ATGTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATG 39223 Query 147184 AGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCAC 147242 | || | | || | || || |||||| || ||||| || | |||||| ||||| Sbjct 39222 ATGCGGC-GATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCAC 39164 Query 147243 GCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301 || || |||| ||||| ||| ||| |||||||||| || || ||||||| ||||| Sbjct 39163 ACCTTGTCCCCTGTAGTCCGTCGTCGC-GTCCACGTACTCAGCGCCGAAGTGCCGCCACT 39105 Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGA 147361 |||||||||| || || || |||||||| || | |||||||| ||| | | | || Sbjct 39104 GGAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGA 39045 Query 147362 GAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 | |||||| | || |||| | |||||||| Sbjct 39044 GGAACTCGCGCGATCCGTTACCATCCCAGAT 39014 Score = 105 bits (116), Expect = 8e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||| ||| | ||||| | || ||||||| |||||| ||||||||||| |||| ||||| Sbjct 39557 CCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCGCCCATGGTGT 39498 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 || | ||||| | || || || ||||||| ||||| |||||||| | || Sbjct 39497 GCGTGAGTGTTCCCGGAGTCAGATCGCAGACATGGGCCAACATGTGCGTGAGCAGAGCGT 39438 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGC 147081 | || ||||||||||| || |||| ||||||||| | |||| |||||| ||| Sbjct 39437 ACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTGGTAGAGC 39382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583448760432000