Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 95.1 1e-14
>seq1094
Length=88458
Score = 95.1 bits (104), Expect = 1e-14
Identities = 280/431 (65%), Gaps = 3/431 (1%)
Strand=Plus/Minus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| || ||| | || ||||| || | ||| ||||||||| ||||| |||||||| ||
Sbjct 25353 GGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAG 25294
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
| ||| || | ||| | ||||| || || || | ||| ||| ||| | ||
Sbjct 25293 AGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGG 25234
Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782
| || | | | |||| || | || |||||||| || || | || | ||
Sbjct 25233 TTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCG 25174
Query 131783 ATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839
| || || |||||| ||| || || | ||| | || | |||||||||| ||
Sbjct 25173 AAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACA 25114
Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899
|| | ||| || | |||||| | | || || || | ||||||||||||| ||
Sbjct 25113 CGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCTGCCAGTG 25054
Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959
|| | ||| ||||||||| || || ||||| ||| || || ||||| | || ||
Sbjct 25053 GCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAG 24994
Query 131960 TTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAA 132019
| | || |||| |||||||| || | ||| ||| | ||||||| | ||||||
Sbjct 24993 GTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCAA 24934
Query 132020 GAGGACAACTG 132030
|| | ||||||
Sbjct 24933 GAAGCCAACTG 24923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424906537582560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |