Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10- 07] 5,380 sequences; 48,332,782 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1094 143 3e-29 seq2014 98.7 1e-15 >seq1094 Length=88458 Score = 143 bits (158), Expect = 3e-29 Identities = 1041/1661 (63%), Gaps = 37/1661 (2%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| ||||| || ||||| | |||||||||||||| || |||||||| | Sbjct 26537 TGAACTGGATGGGAGCAGCAGCGGCCTGGGTGCGGAGGTAGTACATGCCGGTCTTGAGGC 26478 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | ||||||| || | ||||| |||| | |||| | || || | |||| Sbjct 26477 CAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 26418 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || || | || |||||||||||||| || || || || ||||| | || | Sbjct 26417 GGATATTGAGGGACTGCGATTGATCGATGAACGCACCACGGTCGGCGGCCATCTGAACGA 26358 Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 | | | || | | ||||| || ||| ||||||| ||| || |||||||||| Sbjct 26357 --TGGTGCG-CTGGGAAAGCTCCCAGACGGTCTTGTAGAGCGCCTTGATGTCATCTGGGA 26301 Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 | | ||| | || || || || | | ||| | | |||||| | | | Sbjct 26300 TGTTGGGGATCTGCTGAATAGAGCCGTTGGAGGCAATGATGCGGTTCTTCATCTGATCAG 26241 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 118161 |||| || || | | ||| |||| || ||| | |||||||| || |||| Sbjct 26240 ACCACAGTCCGAGGTCAACGAGGTCCTTCAGGAGCCACGGGTTGACAACCTGGAATTCAC 26181 Query 118162 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 118220 | |||||| || | ||| ||||| || | || || ||||| || ||||||||| | Sbjct 26180 CGGCGAGGACACGGCG-AGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTCATTGA-A 26123 Query 118221 CCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 || ||| | ||||| | ||||| |||||||| || || | ||| | | ||| ||| Sbjct 26122 GCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTTGCGGGT 26063 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCC 118338 ||| | | ||| |||| | ||| ||||||||| || | | | | Sbjct 26062 ACCGTGCTGGGCAATCTCGGCCTTCA-AGCTGTCCCAGTCCCAGAGGTCGGTGGGGGTCT 26004 Query 118339 CCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCAT 118398 | |||||| ||| | || || || || |||||||| || |||| || || || | Sbjct 26003 TATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGTTTCGT 25944 Query 118399 ATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTG 118455 | ||||| || || || | || ||| || ||| || ||||| || || | Sbjct 25943 AAGGGCCGTCCCTCTTGGCGAGCTCAACCGAG---GCAGTGAGAGCAGCGTGGTAGATAG 25887 Query 118456 TTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 118515 | || || || || |||| ||||||||| ||||| |||| | || Sbjct 25886 TCTCGAAGATTTGAATGTTCAGCTGCTTGGCCTCAGGAGAATCGAACGGCATACGAAGAG 25827 Query 118516 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 118575 || || | || || ||||| | |||||| | | || || || || | ||| || Sbjct 25826 CAAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACGCATGTTGC 25767 Query 118576 ACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 118634 ||||| || ||| | | || || || | || || | | | || ||||| ||| Sbjct 25766 TCTTCCTGGCT-TCTGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCAGATTCTTG 25708 Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC----AAAACTGCGAGTCTCTTC 118690 | |||| || | || |||||||| | | | || | | || | ||| | Sbjct 25707 ACAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTTC----CTCGAC 25652 Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 || ||| | | || || || | ||||| | || ||||||| | ||||| | | Sbjct 25651 ATCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCATCAGGAGC 25592 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 |||||||| | ||||| ||||| ||| || || ||||||||| | |||||| || Sbjct 25591 GGTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGAATGGTGCCAAGGTTCTTCTG 25532 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| || |||||||| | |||| | || | || || || || Sbjct 25531 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACCTG 25472 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929 || || ||| || || | ||||| | || | ||| | ||||| || | || |||| Sbjct 25471 GGCCTCGAGGATCGCGTACCAGAGCTTCTG-AGCACGGACAGTCTCGCGACCACGACCCT 25413 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 | | ||| |||| ||||||||| || || || ||||| | | || | || || | Sbjct 25412 CCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACCAG 25353 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | || | ||||| | ||| | ||| || || |||||| ||||||||||||| Sbjct 25352 GGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAAGA 25293 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 | || || |||||||| || |||| || || ||| |||| | || || | || || | Sbjct 25292 GATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTGGT 25233 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | ||| | || | |||| | || ||| || |||||||| || ||||| | |||| Sbjct 25232 TCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGCGA 25173 Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 | || || |||| |||||| || || | |||||| ||| | |||| Sbjct 25172 AAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACACAC 25113 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATT 119284 | ||||| || |||| || | | ||| || || || ||| | || | | Sbjct 25112 GGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAAT--GTAGCTGCCAGT 25055 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 ||| | || ||| | || || ||| ||||| || || ||| ||||| || || Sbjct 25054 GGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACA 24995 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | | || || ||||||| || || || || |||| | ||||||||||||| Sbjct 24994 GGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGCA 24935 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAG 119445 | || |||||| |||| |||||||| ||||| |||| Sbjct 24934 AGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAGAG 24894 >seq2014 Length=35049 Score = 98.7 bits (108), Expect = 1e-15 Identities = 166/235 (71%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT-TGATTTTCACGGGCAAC 14292 || |||| || || |||||||||||||||| || || || || | ||| || || Sbjct 32518 TTGCCGATAGCATCGATTTCATCGATGAAAATAATGCAGGGGGTGCTCTTC-CGCGCTGT 32460 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 14352 | | || | || || ||||| || ||||||||||||||||||||||| || | || Sbjct 32459 TGCGAAAAGGTCACGGACTCTAGAGGGGCCGACACCCACAAACATCTCCACGAACTCGGA 32400 Query 14353 GGCG-GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411 || ||| | || ||| || || | ||||||||| || |||| ||||| | | Sbjct 32399 ACCGCTAACGCT-GAAGAAAGGCACTTGAGATTCACCGGCAGTGGCCTTAGCGAGCAACG 32341 Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 |||| || || || || |||| ||||| ||||||||| ||||| ||||||| Sbjct 32340 TCTTACCGGTACCGGGAGGACCTGAGAGAATGGCACCACGCGGGATTTTGGCACC 32286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618393610232800