Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1094 138 1e-27
seq4076 95.1 1e-14
>seq1094
Length=88458
Score = 138 bits (152), Expect = 1e-27
Identities = 257/373 (69%), Gaps = 6/373 (2%)
Strand=Plus/Plus
Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666
|| |||| |||| || ||||| ||||| || ||| || | || || || | |||
Sbjct 25170 CTTTCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTA 25229
Query 104667 TCAACCAAGGTGACGAGGAGG--CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCC 104724
||||| || | ||||||| |||| | || || || |||| |||||||||||||||
Sbjct 25230 AGAACCACGGAAAAGAGGAGGTTCGCGCT--CGTGACCTTTTCTACGCTCTCTGGATTCC 25287
Query 104725 AGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAA 104784
||||||||||||||| | |||||| ||| |||| ||| | ||| | || || || |
Sbjct 25288 CGATCTCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGA 25347
Query 104785 GGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGA 104844
| |||||||| |||| | | |||||||| || || ||||| ||| |||| ||
Sbjct 25348 GTGCCCTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGA 25407
Query 104845 GGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCA 104903
| | || ||||| | | ||| || | ||| | || | | ||| | || || |||
Sbjct 25408 GAAGGAGGGTCGTGGTCGCGAGACTGTCCGTGCT-CAGAAGCTCTGGTACGCGATCCTCG 25466
Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963
|| | || ||| || |||| || | |||| | ||||| ||| ||| |||| ||||
Sbjct 25467 AGGCCCAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGA 25526
Query 104964 GTAATCAAAAGAA 104976
| || || |||||
Sbjct 25527 GCAACCAGAAGAA 25539
>seq4076
Length=19007
Score = 95.1 bits (104), Expect = 1e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 94806 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTAT 94865
||| ||| | || || ||| || ||||||||||||||| || || ||| | | ||
Sbjct 10306 GCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCAT 10247
Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925
|| |||||||||||||| || |||||||| ||| | |||||||| ||||| |||||
Sbjct 10246 TTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTC 10187
Query 94926 TCGTGACGAGGG 94937
||| || |||||
Sbjct 10186 TCGCGATGAGGG 10175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583221575711200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |