Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3000 152 1e-31 >seq3000 Length=185088 Score = 152 bits (168), Expect = 1e-31 Identities = 189/256 (74%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || || | ||| ||||||||| | |||||| |||| ||||| Sbjct 10100 ATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCC-GTCGC 10042 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| ||||||||||||| || ||| | ||||||||||| ||||| || |||||| | Sbjct 10041 TCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCT 9982 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | || || || || || |||| |||||||| | |||||||| | || ||||| Sbjct 9981 GCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGA 9922 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| ||||| | || ||||| ||||||||||| ||||| || ||||||| |||| Sbjct 9921 GAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 9862 Query 230625 GCCTGGTGTGATGAAG 230640 | | ||||| ||| || Sbjct 9861 GGCGGGTGTCATGGAG 9846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057774516646130