Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3000 93.3 4e-14
>seq3000
Length=185088
Score = 93.3 bits (102), Expect = 4e-14
Identities = 199/294 (68%), Gaps = 5/294 (2%)
Strand=Plus/Plus
Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287
||| | || || || |||||||| || ||| | || || || |||||||||||
Sbjct 10470 TCGCTGATGTATGTGTCGATGAGAAGCGAGTAGGTCTCAGAATGGATGTTCTCCATCATA 10529
Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347
||||| || ||||| ||||| ||||| || | || || || || | ||| |||||
Sbjct 10530 ATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGGAGCTGAAGCGTTCG 10589
Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407
| || || ||||||||||||||||| ||||||||| || || | | || |||
Sbjct 10590 ACGAGGTTCTCGTTCACGATGCCGTCAGACGCGGCGAAGAAAGCGAGGACGTGGGAGATG 10649
Query 17408 AAATATTTTTCGTC--CGGTGTAAGAAC--GCGCCAGTCCTTTAAATCTTTGGATATATC 17463
|| | ||||| || || | | | | |||||| | | ||| ||||| | |||
Sbjct 10650 AAGAAGCGCTCGTCATCGTTG-AGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAAAGATC 10708
Query 17464 CACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| || || | ||||| ||| |||| | ||||| || ||||| | ||||||
Sbjct 10709 AATCTCCTCAGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAAAT 10762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517521980512680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |