Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1419 158 1e-33
>seq1419
Length=54520
Score = 158 bits (174), Expect = 1e-33
Identities = 212/293 (72%), Gaps = 8/293 (3%)
Strand=Plus/Minus
Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAG 145949
|||||| || ||||| ||||| |||||||||||| ||||| ||| | | || ||
Sbjct 42567 GTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGA- 42509
Query 145950 CCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCAC 146006
| | || ||| || || |||| | || | |||| ||| ||||| |||||
Sbjct 42508 --TGCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCAC 42451
Query 146007 GCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTG 146066
|| || |||| ||| || ||| | | |||||||||| | || |||||||||| ||||||
Sbjct 42450 ACCTTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTG 42391
Query 146067 GAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAG 146126
||| ||||||||||| || ||||| || ||| | |||| || ||| | | | ||||
Sbjct 42390 GAAGCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAG 42331
Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAG 146177
||| || || || ||||| | ||||||||||||||||| ||||| |||||
Sbjct 42330 GAACTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAG 42278
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/206 (71%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
|||||| | || | ||| | |||||| | || ||||||| |||||| |||||||||||
Sbjct 42854 GGCTCCCGCTCCAACTGCACCTTCAGTGCGTCAACGTGGTCGAGGTACACGTGCGCGTCG 42795
Query 145720 CCCAGGACGTGGATGAA-GTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778
|||| | ||| ||| || ||||| || || | || ||||| | ||||| ||
Sbjct 42794 CCCATGGTGTGCGTGAGTGTTCCCGGAGTC-AGATCGCAGACATGGGCCAACATGTGCGT 42736
Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838
||||| | ||| || ||||||||||| || |||| |||||||| | || |||||
Sbjct 42735 GAGCAGAGCGTACGAAGCAATGTTGAAGGGAACGCCCAAGCCCATGTCACAGGACCGCTG 42676
Query 145839 GTACAGCTGGCAGGAGAGCTCCCCGC 145864
||| ||| | ||| ||| | ||||
Sbjct 42675 GTAGAGCAGACAGTGCAGCACGCCGC 42650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590049870370040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |