Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3378 257 1e-63
>seq3378
Length=101758
Score = 257 bits (284), Expect = 1e-63
Identities = 481/700 (69%), Gaps = 10/700 (1%)
Strand=Plus/Plus
Query 23063 GTGTACTCTACAATTTCGGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTC 23119
|||||||| || |||||| || || ||| |||| || ||||| | || ||
Sbjct 62857 GTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGA---ATGGTGCCAAGGTTCTTC 62913
Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179
|||||||| || || ||||| |||||||| | |||| | || | || || ||||||
Sbjct 62914 TGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTTTCGACC 62973
Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CC 23238
|| | ||||| |||||| ||| | ||||||| | ||| ||| | || | | ||
Sbjct 62974 TGGGCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGGACA-GTCTCGCGACCACGACC 63032
Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298
|| | ||| |||| | ||| | || || ||||| |||| || |||||| || ||
Sbjct 63033 CTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGCAAGACC 63092
Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358
|| | | | || |||||||| |||| | || | ||||| || |||| ||
Sbjct 63093 AGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTTCATGAA 63152
Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418
||||| || ||||| ||||||||||| || || || ||||| ||||||||||| |||
Sbjct 63153 GAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTTTCCGTG 63212
Query 23419 GTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGC 23478
|||||| | || | |||| || || || |||||||||||||||||||| | |||
Sbjct 63213 GTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTAGATGGC 63272
Query 23479 AAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACAC 23538
|| || || || | ||| || || ||||| || ||||| ||||| ||||||||||||||
Sbjct 63273 GAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTTGTACAC 63332
Query 23539 TCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG-AACCTT 23597
| ||||| || | ||| |||||| | |||| || ||| || | | ||
Sbjct 63333 ACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCG-TTAGTACCGGCAATGTAGCTGCCAG 63391
Query 23598 TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGC 23657
| || || | | |||||||| | ||| || || ||| | | || || ||||| || |
Sbjct 63392 TGGCACGGATGCGGTGAACGTTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCAC 63451
Query 23658 ATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAAC 23717
| ||||| ||||||||||| ||||| ||||| ||||| || | ||| | ||| |
Sbjct 63452 AGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGAGGAAGC 63511
Query 23718 ACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757
| |||| || || | ||||| ||| | || ||||||
Sbjct 63512 AAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAG 63551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445746056335920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |