Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3000 131 2e-25
>seq3000
Length=185088
Score = 131 bits (144), Expect = 2e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||| ||||| || || || ||||| | ||||||||| | ||||| | | | |||
Sbjct 10091 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGC 10032
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
||||||||||| | |||||| ||||||||||||| ||||| ||| | ||| || || |
Sbjct 10031 ATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCG 9972
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
|| || | ||| ||||| || || |||||||| || ||| | ||||| |||
Sbjct 9971 CTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCG 9912
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
||| | ||||| || ||||| ||||||| || || || || |||
Sbjct 9911 CTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTAC 9867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496041360879200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |