Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3000 131 2e-25 >seq3000 Length=185088 Score = 131 bits (144), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| ||||| || || || ||||| | ||||||||| | ||||| | | | ||| Sbjct 10091 GAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGC 10032 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||||| | |||||| ||||||||||||| ||||| ||| | ||| || || | Sbjct 10031 ATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCG 9972 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || || | ||| ||||| || || |||||||| || ||| | ||||| ||| Sbjct 9971 CTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCG 9912 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||| | ||||| || ||||| ||||||| || || || || ||| Sbjct 9911 CTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTAC 9867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496041360879200