Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3378 102 1e-16 >seq3378 Length=101758 Score = 102 bits (112), Expect = 1e-16 Identities = 267/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 80354 TAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATT 80413 |||| ||||||||||| || | || |||| |||||||| |||||||| || | Sbjct 63608 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 63667 Query 80414 CTATATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472 | || || || | ||||| || || || |||||||| | ||| ||||| || || || Sbjct 63668 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 63726 Query 80473 ACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAG 80532 | | ||| | || | | ||| || | || | ||| || ||||| || || Sbjct 63727 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 63786 Query 80533 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 80592 | ||| ||||| || || || | ||| | |||||||| | || | ||||| Sbjct 63787 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 63846 Query 80593 ACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAAC 80651 || | || | || | ||| || || || ||||| ||||||| ||||| || || || Sbjct 63847 ACAATTTCGAATGT-CTCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 63905 Query 80652 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT 80711 ||||||| | | ||| | || || | |||| | || || || | |||||| || || Sbjct 63906 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 63965 Query 80712 TGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 || ||||| || | ||| || | |||||| || || ||||| Sbjct 63966 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 64007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718236020007640