Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3378 93.3 5e-14
>seq3378
Length=101758
Score = 93.3 bits (102), Expect = 5e-14
Identities = 265/402 (66%), Gaps = 4/402 (1%)
Strand=Plus/Plus
Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545
|||| |||||||| || || | || || | |||||||| |||||||| || |
Sbjct 63608 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 63667
Query 63546 CTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604
| || || || | ||||| || || || |||||||| | ||| ||||| || || ||
Sbjct 63668 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 63726
Query 63605 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63664
| | ||| || || | | ||| || | || | ||| || ||||| || ||
Sbjct 63727 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 63786
Query 63665 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63724
| ||| ||||| || || || | ||| | |||||||| | || | |||||
Sbjct 63787 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 63846
Query 63725 ACTACATCCATGGTAATACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGAC 63783
|| | || | || | |||| | || || ||| | ||||||| ||||| || |||||
Sbjct 63847 ACAATTTCGAATGTC-TCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 63905
Query 63784 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843
||||||| | | ||| | || || | |||| | || || || | ||||| || ||
Sbjct 63906 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 63965
Query 63844 TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
|| ||||| || | || || |||||||| || || |||||
Sbjct 63966 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 64007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633603082619600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |