Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3378 93.3 5e-14 >seq3378 Length=101758 Score = 93.3 bits (102), Expect = 5e-14 Identities = 265/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545 |||| |||||||| || || | || || | |||||||| |||||||| || | Sbjct 63608 TAGGCGAAGCGTGCGTGAAGTACTTGAGGGACATGAGATTGTAGGTCTCAATGGCCTTCT 63667 Query 63546 CTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 | || || || | ||||| || || || |||||||| | ||| ||||| || || || Sbjct 63668 CAATGTCGTCACCG-TGAATACCGACAGCCACACGCATGATCATCTGCTGCGGCCTCTCG 63726 Query 63605 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63664 | | ||| || || | | ||| || | || | ||| || ||||| || || Sbjct 63727 GCAACCTTTCCGTCAATGCGGAGAAGGTACGACCTCTCAAGAGTCTTGAAACCGAAGTAT 63786 Query 63665 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63724 | ||| ||||| || || || | ||| | |||||||| | || | ||||| Sbjct 63787 TGGTACTGGAAGTCGCGGTCATAGACGATAGCGGAGTTGAGCTCCTCGGCGTGCTTGTTG 63846 Query 63725 ACTACATCCATGGTAATACTTGAA-ATAATAGGAAAATGTTTCCCATTTTTAGGATTGAC 63783 || | || | || | |||| | || || ||| | ||||||| ||||| || ||||| Sbjct 63847 ACAATTTCGAATGTC-TCCTTGGAGATCATGGGAGAGTGTTTCCTGTTTTTGGGGTTGAC 63905 Query 63784 ATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 63843 ||||||| | | ||| | || || | |||| | || || || | ||||| || || Sbjct 63906 ATAGTTGTAGAGATCGGCGATGACAGCCGAAAATTGCTTCTTGGTCTGCTTGTGAAGGTT 63965 Query 63844 TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 || ||||| || | || || |||||||| || || ||||| Sbjct 63966 CGACACGGCGATACGGGCAGCAAGAATGGCGTAGTCGGGATG 64007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633603082619600