Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq703 104 4e-17
seq3401 98.7 2e-15
>seq703
Length=6306
Score = 104 bits (114), Expect = 4e-17
Identities = 666/1043 (64%), Gaps = 54/1043 (5%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | |||||| ||||| ||||| || || ||| ||| ||
Sbjct 3031 CGCCACTGGATGTACTCGGAGGGGGTAGAGTCCAAGTGGTGGTCGATGTGGGCGAAGGCG 2972
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100
||||| | ||| || || || ||||| || | | || ||| ||| ||
Sbjct 2971 TGCTGCTTGATGTAGGCAATACGGATGTTCTCGTGGTGGTAGACCTCACCCGAAGTGGGG 2912
Query 225101 -TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| || || || || ||||| |||| ||| |||| |||||| ||||| |||||||||||
Sbjct 2911 ATGAGC-TCACCAGTCAGGACGTTGACGAGAGTAGACTTGCCAGCACCGTTGGGGCCAAT 2853
Query 225160 CACGCCAATCCGGGATGACATTGCAAC-CTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218
||| |||| ||||| | || | | ||| || | | || | |||||| ||||
Sbjct 2852 GACGGCAATACGGGA-GCCAAGAGAGCACTGGAAGGTGATGTCGG---AGATCTG-GGGC 2798
Query 225219 C---AGTTT----GGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271
|| | |||| |||| || | | | | ||||| | |||||
Sbjct 2797 TTGGAGGTACCGGGGTACTGGAAGGTCATGTTGCTGACACGGACAATGGCCTTGGCCTTG 2738
Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTC 225331
| | | |||||| ||||| |||||||||||||||| ||| || | | | |
Sbjct 2737 GTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAACTTGAACTCCATCTCGGAGGCACCG 2678
Query 225332 AGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGG 225391
|| ||||||||||| || || ||| ||||| | || | ||| || ||
Sbjct 2677 AGCTCGTAGTAAGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGATGTTACCACGG 2618
Query 225392 TGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC-GTCAA 225449
| | ||||||||| | || |||| || | || ||| | | || ||| |
Sbjct 2617 TAACGCTTGAGCTTGAAGCGCT---CGTAGTGGATAACGTGCTGG--ATGGTGTTGTCCA 2563
Query 225450 GGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTGAGGT 225506
||| ||||||||||| | |||||||| | || | | || | | |||||
Sbjct 2562 AGAACTTGGAGTCGTGGGAGATGATGATGGAGGTGCAAG---GAGAGTTGAC---GAGGT 2509
Query 225507 GCGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565
| || | |||||| || ||||| |||||||||||||||| || || ||||| || ||
Sbjct 2508 AC-TGCTCGAGCCAAGCAACGTTCTTGACGTCCATGTGGTTGGTGGGCTCGTCGAGCAGA 2450
Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625
|| || || | || || || ||| || | |||| ||||||||| ||||| || ||
Sbjct 2449 AGAATATCGGGCTCCTCGAAGACGGCACGGGCAAGAGCCAGCTTCATCTTCCAACCACCA 2390
Query 225626 GACAGGGAGCCGATTGAAACAGAGTGCTTAGCTT-CGT-CAAAGCCGTACTCCAGGAGCG 225683
|| || ||| ||| | | | | || ||| || | || ||| ||||| ||||
Sbjct 2389 GAGAGCGAGGTGATGGGAGCCTCGAACT--GCTCGCGAACGAAACCGAACTCCTCGAGCT 2332
Query 225684 T---CTGGATAA-----TGCG-CTCGG-GAGAGCTGCGAGCGGCAACGTTGGGGTCGGAC 225733
| ||||| | || | || || || | | || ||| ||| || || |
Sbjct 2331 TGTTCTGGACATCCTCCTGGGTCTTGGTGACACCAGC-AGCCTCAAGCTTCTTCATGGTC 2273
Query 225734 GAGAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTAC 225793
|| ||| | ||||| || | | | | | ||| | |||||| || |||||
Sbjct 2272 CAGCC--AATGA----CGGTCTGCTCAGTGTCGGCAGAGTCCAGGTCGTGCTCGACGTAG 2219
Query 225794 ACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGG 225853
|| ||| || || || | |||||| ||||| ||||| | || || |||||
Sbjct 2218 ACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAGCTGCTCGTTGTTGATGGCACGC 2159
Query 225854 AGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTG 225913
| ||||| |||| || | |||||||| || | || ||||| | | || |||||
Sbjct 2158 ATGAGGGTGGTCTTACCGGAACCGTTGGGGCCCAGAAGACCGTAGCGGTGGCCACGCTTC 2099
Query 225914 ATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAA 225973
| ||| | || ||| || || |||||| |||| ||||| |||||||| |||
Sbjct 2098 AGACGCAGGTGAGTCTGGTTGAGCAGAATCTTGGCACCGTAGGCCAGGGAGAAAGTGCAG 2039
Query 225974 TCGCACAGGTCCTCACCCTCCTC 225996
| |||||| ||||||||||||||
Sbjct 2038 TTGCACAGATCCTCACCCTCCTC 2016
>seq3401
Length=101255
Score = 98.7 bits (108), Expect = 2e-15
Identities = 282/431 (65%), Gaps = 2/431 (0%)
Strand=Plus/Plus
Query 59091 AGTAGAGCATGCCGGACAGGAAGCAGGCCTTTTGGCGGAAGCTCAGATTGGACTTCCAGA 59150
|||| | |||||| |||| | || | || ||| ||| || ||||| ||||||
Sbjct 35085 AGTACATCATGCCCGACAAATAACATACTTTCTGGATGAAAGAGAGCTTGGATCTCCAGA 35144
Query 59151 AGTGGGGGTTGGTGCACAGAGTCGTGGAACCCAGCGCCCAACGGTATTGCTGGCTGAAGA 59210
| | || || ||| |||||| |||||||||| ||| || ||||||| ||| |
Sbjct 35145 ACTCTGGATTTGTGAGCAGAGTTGTGGAACCCATGCACCAGCGCATTTGCTGGGAGAAAA 35204
Query 59211 ACGACTTGAGCTCGTAGGGGCAAACTCCCTTGGCAAGGTTCAGGGGAATGTACTTGAGCT 59270
||| | | | || ||||| || || ||||| ||| |||| ||||| || |
Sbjct 35205 ACGCGCGGGGATTGTCAGGGCAGACGCCGGCAGCAAGACACAGAGGAACGTACTCGACCG 35264
Query 59271 TCCAGCCGTCGTCAACTACTGCAAAGCCCGTGTGGACGTCCTCGCTGAAGCCAATCTCAG 59330
|||| || |||||| | |||| || |||||||| || ||| | || ||||| |
Sbjct 35265 TCCACCCACGGTCAACAGCCCCAAAACCAGTGTGGACATCTTCGGAATATCCGATCTCTG 35324
Query 59331 CAGTGCCGCCGAAAGGTACAAGCGCCTCTCGGCGGTAGACTGCGCATGTCCCGACGCACA 59390
|||||||||| | | || || || || ||||| || || | || ||||| |
Sbjct 35325 CAGTGCCGCCCACCTCAGCCAGAGCTTCACGACGGTACACGGCATTGCTGCCCACGCAGA 35384
Query 59391 CGGCGCCGCCAAAGGTGTCGCGAGAAACCTGGATGAAACGGTAGAACAGTTCCTGGACGG 59450
| | | || || || ||| ||||| | | |||||||| || || || ||
Sbjct 35385 TCGAGGCCCCCCAGCGGTTGCGGTTGACCTGAACAACGCGGTAGAAAAGCTCTTGACAGG 35444
Query 59451 ATCCAGCAGCGCGCTCAACCCAAGTCTGGTCGGGGCGAACCTC-GAAGAACTGGGGGGTC 59509
|| ||| | |||| ||||| || || || ||| || || ||||||||| || | |
Sbjct 35445 CGCCGGCACCCTGCTCCACCCATGTGTGCTC-AGGCAAAGTTCGGAAGAACTGAGGAGAC 35503
Query 59510 TGCACAATCGC 59520
|| || |||||
Sbjct 35504 TGGACGATCGC 35514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921580339457720
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