Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq3000 259 9e-64
>seq3000
Length=185088
Score = 259 bits (286), Expect = 9e-64
Identities = 373/521 (72%), Gaps = 19/521 (4%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 9864 CTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGAGCGAGATGTTCTC 9923
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | ||| ||||| | |||||
Sbjct 9924 CATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTT--GCCCAGCGCCACCAGC 9981
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| | || || ||| |||||||||| | ||||||| || ||||||||| | ||
Sbjct 9982 AGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCGTTCATGCCAAGAAGA 10041
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
| ||||| | ||| | ||||| ||||||||||| |||| || || || | |||
Sbjct 10042 GCGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCTCGGTGATGATC 10101
Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130
| || |||| |||| || || || | ||| | |||| | | |||| |
Sbjct 10102 TTCTCAACGGATTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 10152
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||| ||||| | |||| ||| || || || ||||||| | |||||||| | |
Sbjct 10153 CAGGCGAAGTCGGTATGCATGCCCTCATCGCGAGAGATGAGCTCATTGGAGAAAGTCAAA 10212
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|||||||||| || | || |||||||||||||| | ||||||||||| |||||||
Sbjct 10213 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAAGAGCCGCTGAAGAAG 10272
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || |||||||| || |||| | | | |||| | | ||||||||| ||
Sbjct 10273 ATACCCTCGACGGCCGCGAAAGCAATGAGGCGCGATGCGAAGGTCGAGTTCTTGTCGCAG 10332
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| ||| |||||||| ||||||||||||||||| ||
Sbjct 10333 ATCCAACGAAGGGCCCAGTCGGCCTTCTTCTTGATGCACGG 10373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931490287171840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |