Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3378 87.8 2e-12
seq3000 86.0 7e-12
>seq3378
Length=101758
Score = 87.8 bits (96), Expect = 2e-12
Identities = 294/455 (65%), Gaps = 2/455 (0%)
Strand=Plus/Minus
Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA 75659
|||| ||||| | || || |||||||| ||| || | || || || | || |
Sbjct 63274 TCGCCATCTACCTCGAGCCGTGGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGA 63215
Query 75660 ACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719
|||| || | || |||| ||| | | || || || | | || |||||||| || |
Sbjct 63214 ACCACGGAAAAGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATC 63155
Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779
| ||||||||||| |||||| || || ||| | || | || || || || |
Sbjct 63154 TCTTCATGAAGCGTGTTGAGCAGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCC 63095
Query 75780 CAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG 75839
| ||||| |||||| |||||||| || || ||||||||| ||||||| |||
Sbjct 63094 CTGGTCTTGCCGACGTCTATGGTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGG 63035
Query 75840 AGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCA 75898
||||| | | | |||||| || | | || | | ||| | || || ||| | |
Sbjct 63034 AGGGTCGTGGTCGCGAGACTGT-CCGTGCTCAGAAGCTCTGGTACGCGATCCTCGAGGCC 62976
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
||| || || || | || | ||| | |||||||| || ||| ||||| |||
Sbjct 62975 CAGGTCGAAACCGGTAACCCCTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAAC 62916
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018
|| ||||| | || || || ||||| || || ||| ||||| | ||||||||
Sbjct 62915 CAGAAGAACCTTGGCACCATTCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACC 62856
Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053
| | ||||| ||||| ||||| || || ||
Sbjct 62855 GCTCCTGATGAAGTCGCTGTGTGCAACTTAGCGTC 62821
>seq3000
Length=185088
Score = 86.0 bits (94), Expect = 7e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCG 65066
|| || || || |||||||||| | ||||| | ||| | || |||| ||||
Sbjct 10376 GTCCCGTGCATCAAGAAGAAGGCCGACTGGGCCCTTCGTTGGATCTGCGACAAGAACTCG 10317
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
||||||| |||||| |||| || ||| || ||||||||||||||| ||| ||
Sbjct 10316 A-CCTTCGCATCGCGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTC 10258
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | | |||| ||| | |||||||| || |||||||| || | ||||| ||
Sbjct 10257 TTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAA 10198
Query 65187 TGAACTTATTTCCCGAGATGAGGG 65210
||| || || || || ||||||||
Sbjct 10197 TGAGCTCATCTCTCGCGATGAGGG 10174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596542374054880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |