Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq446 89.7 7e-13 >seq446 Length=72407 Score = 89.7 bits (98), Expect = 7e-13 Identities = 218/328 (66%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| | | || || | ||| || | || || || ||| Sbjct 39443 AAGATGAAGGAGACCGCCGAGTCTTACCTTGGCAAGAATGTCAAGAACGCCGTCGTCACT 39384 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || ||||| || ||||| || | | || | Sbjct 39383 GTCCCCGCCTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCAGATCTCT 39324 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || || ||| || | || |||| || || || || || || | || || ||||| Sbjct 39323 GGCCTGAA-TGTCCTCCGTGTTGTCAACGAGCCCACGGCTGCCGCTCTCGCCTACGGTCT 39265 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || ||| | ||||| | | || ||| |||||| ||||||||||| || Sbjct 39264 TGAGAAGGAGCAGGACCGCGTCATTGCTG------TCTATGATCTTGGTGGTGGTACTTT 39211 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || |||| | || | || | ||||| || ||| | || ||||| Sbjct 39210 CGATATTTCCATTCTTGAGATCCAGAACGGCGTCTTCGAGGTCAAGTCCACCAACGGTGA 39151 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || ||||| || || |||||| Sbjct 39150 CACTCACCTCGGTGGCGAGGACTTCGAT 39123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657832376804720