Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3000 185 1e-40
seq659 129 9e-24
seq341 114 2e-19
seq3413 87.8 3e-11
>seq3000
Length=185088
Score = 185 bits (204), Expect = 1e-40
Identities = 192/252 (76%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| |||||||| || || || |||||| |||||| ||||| |||||||| | ||
Sbjct 9851 TGACACCCGCCTTCTGGTAGTCACCAACGCGCTTCTCGAAGAAGTTCGTCTTGCCGTTGA 9910
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| || ||||| ||||| | || |
Sbjct 9911 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGTACTTCTTGTTGCCCA 9970
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
||| | | ||||||||||| || ||||| || ||||||||||||||||| | |||||||
Sbjct 9971 GCGCCACCAGCAGGCGGTCAGCAACGAACTCGATGTACTGGCACATGAGAGTCGCGTTCA 10030
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || || ||||| || | || ||| ||||| |||||||||||||| ||||
Sbjct 10031 TGCCAAGAAGAGCGACGGGAAGAGCGTCCGTGAGGAACTCCTTCTCGATCTCGACAGCCT 10090
Query 794131 CGATGATGATCT 794142
|| |||||||||
Sbjct 10091 CGGTGATGATCT 10102
>seq659
Length=68631
Score = 129 bits (142), Expect = 9e-24
Identities = 95/111 (86%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||||||||||||||| ||| | || |||||| | || |||||||| |||||||||
Sbjct 35105 GCCGCCAACTACCTCGACATTAAGGCACTTCTCGATGTTGGCTGCAAGACTGTGGCCAAC 35164
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||||||||| ||||| || ||||||||||| || |||||| ||
Sbjct 35165 ATGATCAAGGGCAAGTCTCCCGACGAGATCCGCAAGACTTTCAACATCCAG 35215
>seq341
Length=154331
Score = 114 bits (126), Expect = 2e-19
Identities = 212/309 (69%), Gaps = 3/309 (1%)
Strand=Plus/Plus
Query 2175077 GCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTG 2175136
|||||||||||||||||| || ||||| || || | ||| | || |||| ||||||||
Sbjct 23028 GCCGTCGGTGCCGTTTTTGAAGCCGACGGGGAAGGACAGGCCGGAGGCCAGCTCGCGGTG 23087
Query 2175137 CACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATA 2175196
|| |||||||||||||||||||||||| | |||||| | | ||||| || | ||
Sbjct 23088 CAGCTGGCTCTCGGTGGTGCGCGCGCCAATGGCGCCGACGGTGATCAGGTCGGCGAGGTA 23147
Query 2175197 GGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCAG 2175256
||| | | | | || | |||| || | |||| ||| ||| || |||
Sbjct 23148 CTGCGGCGAGATGGTGTCCAGCATCTCGCTGGCGATGGGCATGCCAGCGT--TCG-TCAG 23204
Query 2175257 GTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGAG 2175316
|||| | || | ||||| | ||| || | | | | || |||||
Sbjct 23205 GTCGACGAACATCTGCCGCGACACGCGGAGCCCTTTGTTGATCTTGAAGGAGTTGTCGAT 23264
Query 2175317 GTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGC 2175376
|||||||||| || ||||||||||| |||||||| || | ||||| |||| ||||||
Sbjct 23265 GTCGGGGTCGTTGATGAGGCCCTTCCAGCCGACGGTTGTTCTGGGCTTCTCGAGATAGGC 23324
Query 2175377 GCGCATGAC 2175385
|||||| ||
Sbjct 23325 GCGCATCAC 23333
>seq3413
Length=97877
Score = 87.8 bits (96), Expect = 3e-11
Identities = 137/192 (71%), Gaps = 7/192 (4%)
Strand=Plus/Minus
Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369
|||| | ||| |||||| || |||||||||||| |||||||| ||||| ||||| ||||
Sbjct 29978 CGTCAATGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGA 29919
Query 2175370 CATAGGCGCGCATGACCACCAGGAGAGCGTCGCCGACCTCTG--TCTCGGCAAAGGTGCG 2175427
||||||||||||| | | | ||| |||||| ||| | | ||||| | ||
Sbjct 29918 GGTAGGCGCGCATGATGA--TGCACAGC-TCGCCG--CTCAGCTTATCGGCCAGGGCCTT 29864
Query 2175428 CAGCCGTCGGCCATACTCGACGATGGCCTGGGGATCGTGCGCCGAACACGGACCGACGAC 2175487
||| || || | ||||||||| || | || ||||| ||| || || ||||| |
Sbjct 29863 CAGGCGCTGGGCGTACTCGACGGCGGTTTCCGGGTCGTGGATCGAGCAGGGGCCGACCAT 29804
Query 2175488 CACCAAGAGACG 2175499
|||| |||||
Sbjct 29803 GACCAGCAGACG 29792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915858026477789
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |