Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3000 98.7 9e-16 >seq3000 Length=185088 Score = 98.7 bits (108), Expect = 9e-16 Identities = 165/229 (72%), Gaps = 10/229 (4%) Strand=Plus/Minus Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104 ||||| || ||| ||||| |||||||| | || | || || |||||||| | || || Sbjct 10091 GAGGCTGTCGAG-ATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGG 10033 Query 47105 CATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGC 47163 ||||||||| || || |||||| | || || ||||| || || || || ||| ||||| Sbjct 10032 CATGAACGCGACTCTC-ATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGG 9974 Query 47164 AGCTCGGACAAC-CGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACA 47220 ||| || |||| ||| || | || |||| || || || || || ||| | |||| Sbjct 9973 CGCT-GGGCAACAAGAAGTACTACAA--CTCGACCAACCCCTTCGACTTCATGGAGAACA 9917 Query 47221 TTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | |||||| | ||||| || || || |||||||| || || || || || Sbjct 9916 TCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 9868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476589448656360