Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3000 98.7 9e-16
>seq3000
Length=185088
Score = 98.7 bits (108), Expect = 9e-16
Identities = 165/229 (72%), Gaps = 10/229 (4%)
Strand=Plus/Minus
Query 47046 GAGGCGGT-GAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104
||||| || ||| ||||| |||||||| | || | || || |||||||| | || ||
Sbjct 10091 GAGGCTGTCGAG-ATCGAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGG 10033
Query 47105 CATGAACGC-ACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGC 47163
||||||||| || || |||||| | || || ||||| || || || || ||| |||||
Sbjct 10032 CATGAACGCGACTCTC-ATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGG 9974
Query 47164 AGCTCGGACAAC-CGAAATATTTTAATGCTCG--TAATCCGTTTGAGTTTATGAACAACA 47220
||| || |||| ||| || | || |||| || || || || || ||| | ||||
Sbjct 9973 CGCT-GGGCAACAAGAAGTACTACAA--CTCGACCAACCCCTTCGACTTCATGGAGAACA 9917
Query 47221 TTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
| |||||| | ||||| || || || |||||||| || || || || ||
Sbjct 9916 TCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTA 9868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476589448656360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |