Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq115 84.2 2e-11
>seq115
Length=135656
Score = 84.2 bits (92), Expect = 2e-11
Identities = 195/291 (67%), Gaps = 11/291 (4%)
Strand=Plus/Plus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
||||| || | || ||||||||| | || || |||| ||| ||||| |||||||||||
Sbjct 107811 CCCAAGATCATCAACGGTCCTGAAGTGTTGAACAAATTTGTCGGTCAGTCGGAAGAAAAC 107870
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTC 19547
| || | ||||| || || || | ||||| || | |||||| | | ||
Sbjct 107871 ATCCGGAAGCTATTTGCCGATGCCGAGAAGGAACAGAAG-GAGAAGGGCGACGAGAGCGG 107929
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
| | || || || || | ||||| |||| || | || ||||| ||||| |
Sbjct 107930 TCTCCATATCATCATCTTCGATGAGCTGGATGCTGTATGCAAGCAGAGAGGCAGCGGCGC 107989
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||| | ||| ||||| ||||| ||||| || | |||||
Sbjct 107990 TGGCGGTGGCACTGGTGTCGGTGATAGTGTCGTCAACCAACTGCTGTCGAAGCTGGACGG 108049
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
||| | ||| |||| ||| | | | ||||||||||| ||| || ||||
Sbjct 108050 TGTCGAGCAATTGAACAATTTGCTGTTGATTGGCATGACGAATCGAATGGA 108100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397438314574255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |