Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3378 311 1e-79 seq3000 125 8e-24 >seq3378 Length=101758 Score = 311 bits (344), Expect = 1e-79 Identities = 863/1306 (66%), Gaps = 38/1306 (3%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||| || ||||| ||| ||||| ||||||||| | || || ||||||||| ||| Sbjct 62259 GAATTCACCGGCGAGGACACGGCGAGAGTAGATGTTTGAGGTATAAGGCTCGAAACACTC 62318 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||| || | |||||| ||||||||| || ||||| || || || || | || || Sbjct 62319 ATTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTGGGCATTGGAGCAACGAGCAAGGAGTT 62378 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680 || ||| ||| |||||| |||| | || |||||| | || | | Sbjct 62379 GCGGGTACCGTGCTGGGCAATCTCGGCCTTCAAGCTGTCCCAGTCCCAGAGGTCGGTGGG 62438 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | | ||||||||| ||| || || |||| |||||| || |||| |||||| Sbjct 62439 GGTCTTATTCCACATGTCATATTGCAGAATTCCCTGGGACGCAGGGCTGCCCTGGAACGT 62498 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 ||||||| || ||| ||||||||| || || | || || |||||||| | Sbjct 62499 TTCGTAAGGGCCGTCCCTCTTGGCGAGCTCAACCGAGGCAGTGAGAGCAGCGTGGTAGAT 62558 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTC-GTCGAA-CGAAAGGC-- 78856 || ||||||||| |||| |||| ||||| ||| | ||| |||| ||| Sbjct 62559 AGTCTCGAAGATTTGAATGTTCAGCTG------CTTGGCCTCAGGAGAATCGAACGGCAT 62612 Query 78857 -CGAGCATCATGAAGA-CATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCG 78914 ||| | || | | | | || || || || | ||| || | |||||| || ||||| || Sbjct 62613 ACGAAGAGCAAGGAAAGCGTCAGCAAGACCGTTGACACCAACAGCGATAGGACGGTGACG 62672 Query 78915 CATGTTGCTCTTTCGGGCCGCCTCGGTC-GGGTAAAAGTTCCGATCGATGACGCGGTTCA 78973 |||||||||||| | ||| | | | | ||||| ||| || |||| ||||| Sbjct 62673 CATGTTGCTCTTCCTGGCTTC-TGGAACTGGGTAGTGGTTAATGTCAATGATCTTGTTCA 62731 Query 78974 GGTTACGCGTGACGA---CCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGAT-TT 79029 | || | |||| | || |||| ||||||| | || ||| || | | || Sbjct 62732 GATT---CTTGACAAGCACCTGAGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCTT 62788 Query 79030 CCT-----TTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGT 79084 ||| | || ||| || ||||| ||| || || | ||||||||| || || | Sbjct 62789 CCTCGACATCGACGAAGGTGGGTAGCGCCAGAGACGCTAAGTTGCACACAGCGACTTCAT 62848 Query 79085 CCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGA-CGACTTGATGGTGCCGATG 79143 | || | ||||| |||||| ||||| || || | || |||||||| | | Sbjct 62849 CAGGAGCGGTGTACTCGACGATTTCGCAGCACAGGTTGGAGCTACGA-ATGGTGCCAAGG 62907 Query 79144 TTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTC 79203 ||||||||||||||||| ||| ||| ||||||||| ||||| | || | ||||| Sbjct 62908 TTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTACAACATGAAGGGGTTACCGGTT 62967 Query 79204 TCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTAC 79263 || ||||| || ||| | ||| ||||| | | | || |||||| || | | | Sbjct 62968 TCGACCTGGGCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGGACAGTCT-CGCGACC 63026 Query 79264 -CGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGG 79322 ||||||| | ||| | ||| | | | ||| |||| |||||||| |||| Sbjct 63027 ACGACCCTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAGACGTCGGC 63086 Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTC 79382 || || |||||||||| |||||||| ||| |||| ||| || |||||| || Sbjct 63087 AAGACCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCAACACGCTT 63146 Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 ||||||||| || || ||||| || || ||| ||||| || || | |||||| | Sbjct 63147 CATGAAGAGATCGGGAATCCAGAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCTTT 63206 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 || |||||| ||| || ||||||||| | || || || ||||||||||| || || Sbjct 63207 TCCGTGGTTCTTACGGAGGTCGAGAAAGCTGAAGACATCAGCATGCCACGGCTCGAGGTA 63266 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 ||||||||| | ||| ||||||| || ||||||| ||||| ||||| |||||||| Sbjct 63267 GATGGCGAAAGCACCGGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTGTT 63326 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622 | | || |||||||| || | || ||||| | | |||||| || ||| || | Sbjct 63327 GTACACACGGAGCATAGGGATGAGGCCGTTGCTGGTGCCGTTAGTACCGGCAATGTAGCT 63386 Query 79623 ACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGT 79681 || | || || ||| || | || | ||||| || |||| ||||||||| Sbjct 63387 GCCAGTGGCACGGATGCGGTGAAC-GTTCAGACCGATACCACCGGCGGTCTTGGAGATCA 63445 Query 79682 GCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCA 79741 || || ||| || || |||||||| ||||| || || |||||||| ||| | Sbjct 63446 TGGCACAGGTCTTCAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATGTCGATGA 63505 Query 79742 GGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAG 79787 ||||||| | || ||| || ||| ||||| || ||||| || Sbjct 63506 GGAAGCAAGAAGCCAACTGAGGCTTGGGAGTACCAGCATTGAACAG 63551 Score = 264 bits (292), Expect = 1e-65 Identities = 1065/1648 (65%), Gaps = 81/1648 (5%) Strand=Plus/Minus Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 || ||||| || ||||| ||| || ||| || | || ||||| | | |||||| Sbjct 63551 CTGTTCAATGCTGGTACTCCCAAGCCTCAGTTGGCTTCTTGCTTCCTCATCGACATGAAG 63492 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 || || ||||||||||| |||||||| || || ||| || || ||||||||| Sbjct 63491 GAGGATAGCATTGAGGGTATCTACGACACCCTGAAGACCTGTGCCATGATCTCCAAGACC 63432 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAATGG 19395 |||| |||||||| | || | || ||||| | | ||| | || || Sbjct 63431 GCCGGTGGTATCGGTCTGAAC-GTTCACCGCATCCGTGCCACTGGCAGCTACATTGCCGG 63373 Query 19396 GACGAACGG-AGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCA 19454 || ||||| | ||| |||| || |||| |||||||| || | ||||||||| ||| Sbjct 63372 TACTAACGGCACCAGCA-ACGGCCTCATCCCTATGCTCCGTGTGTACAACAACACTGCCC 63314 Query 19455 GGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCAT 19514 | ||||| ||||||| || ||| ||| || | |||||||||||||||||||| | Sbjct 63313 GCTACGTTGACCAGGGTGGTAACAAGCGCCCCGGTGCTTTCGCCATCTACCTCGAGCCGT 63254 Query 19515 GGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGC 19574 |||| || || ||| | || ||||| || || |||||| || | |||||| | | Sbjct 63253 GGCATGCTGATGTCTTCAGCTTTCTCGACCTCCGTAAGAACCACGGAAAAGAGGAGGTTC 63194 Query 19575 GCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGA 19634 || ||| ||||| ||| || | |||||||| || || |||||| || |||||| Sbjct 63193 GCGCTCGTGACCTTTTCTACGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGC 63134 Query 19635 AGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACG 19694 || ||| ||| ||| |||||||| |||| |||||||| || |||||||||| | Sbjct 63133 AGAACGGCACCTGGACCCTCATGTGCCCTAACGAGTGCCCTGGTCTTGCCGACGTCTATG 63074 Query 19695 GCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGAAGGTG 19753 | |||| ||| | | | ||| | || | |||| || | || | || Sbjct 63073 GTGAGGAATTCGAGGCCCTCTACGAGCAGTATGAGAAGGAGGGTCGTGGTCGCG-AGACT 63015 Query 19754 GTCCGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACC 19812 ||||| || | | | ||||| | |||| ||||| | ||||||||| ||||| | || Sbjct 63014 GTCCGTGCTCAGAAGCTCTGGTA-CGCGATCCTCGAGGCCCAGGTCGAAACCGGTAACCC 62956 Query 19813 GTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGAT 19872 | ||||| ||||||||| | ||| |||| || ||||||||| | ||| | || Sbjct 62955 CTTCATGTTGTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCAT 62896 Query 19873 CAAGTCG-TCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCG 19931 || | ||||||||||| |||||| | ||| || || || || || | Sbjct 62895 -TCGTAGCTCCAACCTGTGCTGCGAAATCGTCGAGTACACCGCTCCTGATGAAGTCGCTG 62837 Query 19932 TGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTC----------AAGGCCTCCTCC 19981 |||| || | ||||| ||| || || || |||||| |||| | | Sbjct 62836 TGTGCAACTTAGCGTCTCTGGCGCTACCCACCTTCGTCGATGTCGAGGAAGGTGT----C 62781 Query 19982 TTCGACTTTGCCAAATTGTACGAGGTGACCCGGG---TCGTCACGCGTAATCTGAATCGC 20038 | |||||| || | ||||||| || | || | |||| | |||||||| Sbjct 62780 TACGACTTCAAGAAGCTTCACGAGGTTACTCAGGTGCTTGTCAAG---AATCTGAACAAG 62724 Query 20039 GTCATCGATCGGAACTTTTACCC-GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCG 20097 |||| || ||| ||||| | | | | || | ||| || ||||| ||||| Sbjct 62723 ATCATTGACATTAACCACTACCCAGTTCCA-GAAGCCAGGAAGAGCAACATGCGTCACCG 62665 Query 20098 GCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCT--CA 20155 || ||||| | || ||| | || || || |||| |||| | ||||| | | | | Sbjct 62664 TCCTATCGCTGTTGGTGTCAACGGTCTTGCTGACGCTTTCCT--TGCTCTTCGTATGCCG 62607 Query 20156 TTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCG 20215 ||||| ||| |||| |||| |||| ||||||||| | | |||||||| Sbjct 62606 TTCGATTCTCCTGAGGCCAAGCAGCTGAACATTCAAATCTTCGAGACTATCTACCACGCT 62547 Query 20216 GCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGG 20275 || ||| | ||| || |||||||| ||||||||| ||||| |||||| |||| Sbjct 62546 GCTCTCACTGCCTCGGTTGAGCTCGCCAAGAGGGACGGCCCTTACGAAACGTTCCAGGGC 62487 Query 20276 TCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTG------GGGCGTCACTGA-GAA 20328 || |||||| |||| || || || |||||||| | | ||| || Sbjct 62486 AGCCCTGCGTCCCAGGGAATTCTGCAATATGACATGTGGAATAAGACCCCCACCGACCTC 62427 Query 20329 TGAGTTTTGGAGCGCCCTCAAGGTTGAGATCAAGACC--CACGGGCTTCGCAACTCGTTG 20386 || | | ||| | | | |||| ||||| | || ||||| |||||||| ||| Sbjct 62426 TGGGACTGGGA-CAGCTTGAAGGCCGAGAT--TGCCCAGCACGGTACCCGCAACTCCTTG 62370 Query 20387 CTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTC 20446 ||||| || || ||||| || ||||||||| |||||| | || ||| ||| |||| Sbjct 62369 CTCGTTGCTCCAATGCCCACTGCCTCGACCAGCCAGATTCTCGGCTTCAATGAGTGTTTC 62310 Query 20447 GAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTA 20506 ||||| || || | |||||||||| || ||| || |||||||| ||| | || Sbjct 62309 GAGCCTTATACCTCAAACATCTACTCTCGCCGTGTCCTCGCCGGTGAATTCCAGGTTGTC 62250 Query 20507 AAC---AAGCACCT---GGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATT 20560 ||| || ||| || || || ||| | ||| ||||||| | || Sbjct 62249 AACCCGTGGCTCCTGAAGGACCTCG--TTG----ACCTCGGACTGTGGTCTGATCAGATG 62196 Query 20561 AAGAA-TGAA--ATTG--TCCGAGCCGGCGGGAGCGTCCAGGCATTGGATATCC-----C 20610 ||||| | | |||| ||| | |||| || | || ||| || | Sbjct 62195 AAGAACCGCATCATTGCCTCCAA--CGGC-------TCTATTCAGCAGATCCCCAACATC 62145 Query 20611 CCAGA--ACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATC 20668 ||||| || |||||| | |||| |||||| ||||| | | ||| | |||| | Sbjct 62144 CCAGATGACATCAAGGCGCTCTACAAGACCGTCTGGGAGCTTTCCCAGCGCACCATCGTT 62085 Query 20669 GACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATG 20728 | ||||| ||||| || || || | |||||| || || ||||| |||||| || |||| Sbjct 62084 CAGATGGCCGCCGACCGTGGTGCGTTCATCGATCAATCGCAGTCCCTCAATATCCACATG 62025 Query 20729 GAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTC 20788 || | || | ||| ||| | | ||| ||||| | || ||| | || ||| Sbjct 62024 AAGGACCCCACGATGGGCAAGATCACCTCGATGCACTTCGCTGGTTGGAAGCTTGGCCTC 61965 Query 20789 AAGACGGGCATGTACTATCTGCGGACCC 20816 ||||| ||||||||||| || || |||| Sbjct 61964 AAGACCGGCATGTACTACCTCCGCACCC 61937 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| |||||||| || |||||| || | |||||| | | |||| Sbjct 61948 TAGTACATGCCGGTCTTGAGGCCAAGCTTCCAACCAGCGAAGTGCATCGAGGTGATCTTG 62007 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | |||| || |||| ||| ||||| ||||| || || |||||| ||||||| Sbjct 62008 CCCATCGTGGGGTCCTTCATGTGGATATTGAGGGACTGCGATTGATCGATGAACGCACCA 62067 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 |||||||| ||||| | | || | || | || |||||||| |||| ||| | Sbjct 62068 CGGTCGGCGGCCATCTGAACGATGGTGCGCTGGGAAAGCTCCCAGACGGTCTTGTAGAGC 62127 Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400 ||||| | || || |||||| Sbjct 62128 GCCTTGATGTCATCTGGGATGT 62149 >seq3000 Length=185088 Score = 125 bits (138), Expect = 8e-24 Identities = 301/448 (67%), Gaps = 22/448 (5%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 || ||||| ||||| || ||| || || ||||||||| ||||| ||| | ||| Sbjct 10304 CGCCTCATTGCTTTCGCGGCCGTCGAGGGTATCTTCTTCAGCGGCTCTTTCGCCTCCATT 10245 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 ||||||||||| ||||||||||||||||| || ||| ||||||||| ||||| || || Sbjct 10244 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTTTGACTTTCTCCAATGAGCTCATCTCT 10185 Query 60102 CGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATT--CACACCTATTGGAA 60158 || || |||||| | ||| || || || || | ||| | | |||| | | | ||| Sbjct 10184 CGCGATGAGGGCATGCATACCGACTTCGC-CTGCCTGCTGTTCTCGCACATCAAGTCGAA 10126 Query 60159 AAATGCCCTTCCAAGGAT--ATTCACAAGATTGTTCAGTG-GGCTTGTGAAGTGGAGAGC 60215 |||| || | || || | |||| | ||| | |||| || | |||| Sbjct 10125 ----GCCCAGCCCCGAATCCGTTGAGAAGA-TCATCACCGAGGCTGTCGAGATCGAGAAG 10071 Query 60216 GAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACG 60275 |||||| |||| || || ||||| | || | || ||| |||| ||| Sbjct 10070 GAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGCATGAACGCGACTCTCATGTGC 10011 Query 60276 CAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGG-----AGAAGGACCAA 60330 |||||||| |||| || || |||||||| ||| | | || ||||| || Sbjct 10010 CAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAGTAC--- 9954 Query 60331 TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCA 60390 ||| | || ||||| ||||||| ||||||| ||||||| | | || ||||| | Sbjct 9953 --TACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACGA 9896 Query 60391 ACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||| |||||||| || || || || Sbjct 9895 ACTTCTTCGAGAAGCGCGTTGGTGACTA 9868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548499766699440