Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1419 131 1e-25 >seq1419 Length=54520 Score = 131 bits (144), Expect = 1e-25 Identities = 255/377 (68%), Gaps = 0/377 (0%) Strand=Plus/Minus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 |||||| || || |||||||| || ||| || ||||| |||| || |||||| Sbjct 42567 GTGGCAAGGGGGCAGAGCCATCTTCTTCAGGTCCGCCGGATTCCACGCGCTCATGATGAT 42508 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201 ||| | || | || |||||| | | ||| | | | |||||||||||| || Sbjct 42507 GCGGCGATCGTACGGCTTGTTCTTAAGCTTGTCGATCACATCCGCCAGCTGATCCACACC 42448 Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 ||| |||||| | | || |||| |||||| || ||||| |||| ||||||||| Sbjct 42447 TTGTCCCCTGTAGTCCGTCGTCGCGTCCACGTACTCAGCGCCGAAGTGCCGCCACTGGAA 42388 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321 ||||| || || || ||||| ||||| || | |||| || ||| |||| | || Sbjct 42387 GCCGTAGACGGGGCCTAGGTCGCCCTCCTCGCGGTGCGAGAGGCCGACACTGTCGAGGAA 42328 Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTT 30381 || | || ||||| | ||||||||||| || || ||| ||||| || || Sbjct 42327 CTCGCGCGATCCGTTACCATCCCAGATCTTGACGCCAGCCTCGGAGAGAGGCTTCGATGA 42268 Query 30382 TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTT 30441 |||| ||| ||| |||||||| || || | | |||||| | ||||| | ||| Sbjct 42267 TGTGCTGCCTGCGACAAACCACAGGAGTTCGGCTATGACGGCGCGCAGGAAGACGCGCTT 42208 Query 30442 GGTCGTGAGGAGGGGAA 30458 ||| |||||||| |||| Sbjct 42207 GGTGGTGAGGAGCGGAA 42191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406292320583892