Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10-
07] 3,651 sequences; 45,838,930 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq3261 98.7 2e-15
seq3378 96.9 8e-15
>seq3261
Length=93105
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||||||||| || ||||| || |||||||| || || | || || | |||||
Sbjct 35727 AGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCC 35786
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| || || || ||||| || |||| || ||||||||
Sbjct 35787 TCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 35845
>seq3378
Length=101758
Score = 96.9 bits (106), Expect = 8e-15
Identities = 193/283 (68%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|||| |||||| ||||||||||| | |||| ||| || |||||| ||||||||
Sbjct 62902 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG-TGG--TCCTTGTACAACATGAAGGGG 62958
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || || | || ||| |||| || | ||| |||| ||| || |||||||||
Sbjct 62959 TTACCGGTTTCGACCTGGGCCTCGAGGATCGCGTACCAGAGCTTCTGAGCACGGACAGTC 63018
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
| | || || ||||| |||| | |||||| ||||||||||| ||||||
Sbjct 63019 TCGCGACCACGACCCTCCTTCTCATACTGCTCGTAGAGGGCCTCGAATTCCTCACCATAG 63078
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| || | ||||| || ||| || ||||| | ||| |||| |||| | ||
Sbjct 63079 ACGTCGGCAAGACCAGGGCACTCGTTAGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCA 63138
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|| || ||||||||||| || | |||||| || |||||||
Sbjct 63139 ACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCGTAGAAAA 63181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159097776680615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |