Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307935.1_202015-10- 07] 3,651 sequences; 45,838,930 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3000 111 3e-19 seq3261 105 1e-17 >seq3000 Length=185088 Score = 111 bits (122), Expect = 3e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||| | |||||| |||| | |||| | |||||||| || |||| Sbjct 10076 GAGAAGGAGTTCCTCACGGACGCTCTTCCCGTCGCTCTTCTTGGCATGAACGCGACTCTC 10017 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| ||||| || | | |||||||| || || |||| Sbjct 10016 ATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCTGCTGGTGGCGCTGGGCAACAAGAAG 9957 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||| | |||||||||| || |||||| ||| || ||| | || || || Sbjct 9956 TACTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCAACGGCAAGACG 9897 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||||||| ||||| || | || || || | | | ||||| Sbjct 9896 AACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAAGGCGGGTGT 9853 >seq3261 Length=93105 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || |||||||||||||| | Sbjct 35711 ACCACCACGCAGGCGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 35770 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 35771 CAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTCCGGGGG 35830 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 35831 AATGCCCTCCTTGTCT 35846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046690235175754