Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq4397 152 1e-31
seq3677 93.3 9e-14
>seq4397
Length=39634
Score = 152 bits (168), Expect = 1e-31
Identities = 189/256 (74%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || || || | ||| ||||||||| | |||||| |||| |||||
Sbjct 29534 ATCATCACCGAGGCTGTCGAGATCGAGAAGGAGTTCCTCACGGACGCTCTTCCC-GTCGC 29592
Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| ||||||||||||| || ||| | ||||||||||| ||||| || |||||| |
Sbjct 29593 TCTTCTTGGCATGAACGCGACTCTCATGTGCCAGTACATCGAGTTCGTTGCTGACCGCCT 29652
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| || || || || || |||| |||||||| | |||||||| | || |||||
Sbjct 29653 GCTGGTGGCGCTGGGCAACAAGAAGTACTACAACTCGACCAACCCCTTCGACTTCATGGA 29712
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
| ||| ||||| | || ||||| ||||||||||| ||||| || ||||||| ||||
Sbjct 29713 GAACATCTCGCTCAACGGCAAGACGAACTTCTTCGAGAAGCGCGTTGGTGACTACCAGAA 29772
Query 230625 GCCTGGTGTGATGAAG 230640
| | ||||| ||| ||
Sbjct 29773 GGCGGGTGTCATGGAG 29788
>seq3677
Length=33981
Score = 93.3 bits (102), Expect = 9e-14
Identities = 207/310 (67%), Gaps = 3/310 (1%)
Strand=Plus/Minus
Query 319360 GTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGA 319419
|| |||| || | |||||| ||| | ||||| || ||| |||||||||| |||
Sbjct 24451 GTATCGGAGAGAGTGTAGTAGCTCTTGGCCTCGGGTTTCTGCTTGACGAACTCGGCCAGG 24392
Query 319420 TTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACA 319479
|| |||||||| |||||| ||| ||||| ||| || |||||| ||
Sbjct 24391 TTGCCCTTGTAGCATACCAGCTTC---TTACCCTCGTAGTGGTAGATGTCGGTGCAGACC 24335
Query 319480 GCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATC 319539
| || ||||| ||||||||||| || ||||||| || | | ||| | | || |
Sbjct 24334 TCATCCAGGAAGCCGGAGTCGTGGGAAACAATCAAGCTGGTGATTTCCGTGTGCTTCTTG 24275
Query 319540 AGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGA 319599
||||| || || ||| | ||| | || | |||||| ||||| ||||| ||
Sbjct 24274 AGGTAGTCTTGCAGCCAGGCAATGTTTGCAACGTCCAAATGGTTAGTCGGTTCGTCCAGT 24215
Query 319600 AGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCT 319659
|| | | | ||| || ||||| ||||| || || || || ||||| ||||| ||
Sbjct 24214 AGGAAGACATCAGCGCGCATAAGCATGGCACGGGCGAGGGCAAGCTTCATCTTCCAACCA 24155
Query 319660 CCGGAAAGAG 319669
||||||||||
Sbjct 24154 CCGGAAAGAG 24145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057762874301300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |